Assay Details
Target Gene Details
Entrez Gene ID: | 81889 |
Gene Name: | fumarylacetoacetate hydrolase domain containing 1 |
Gene Aliases: |
C16orf36, YISKL |
Location: |
Chr.16:1827224-1840207 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAHD1 | NM_001018104.2 | 3 | 1381 | NP_001018114.1 |
NM_001142398.1 | 2 | 1262 | NP_001135870.1 | |
BC063017.1 | 2 | 1266 | AAH63017.1 |
Target Gene Details
Entrez Gene ID: | 254528 |
Gene Name: | meiosis specific with OB domains |
Gene Aliases: |
C16orf73, gs129 |
Location: |
Chr.16:1833983-1872178 on Build GRCh38 |
Assay Gene Location: | Within Intron 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MEIOB | NM_001163560.2 | NP_001157032.1 | ||
NM_152764.2 | NP_689977.2 | |||
BC029829.1 | AAH29829.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv517196 | Chr.16:1729694 - 1844960 on Build GRCh38 | Gain+Loss | MEIOB NME3 IGFALS SPSB3 FAHD1 NUBP2 EME2 MRPS34 MIR3177 HAGH MAPK8IP3 |
nsv833119 | Chr.16:1834308 - 1911484 on Build GRCh38 | Loss | MEIOB FAHD1 LINC00254 HS3ST6 |
nsv571175 | Chr.16:1806439 - 1875278 on Build GRCh38 | Loss | MEIOB FAHD1 HAGH |
nsv1040440 | Chr.16:1811739 - 1866102 on Build GRCh38 | Gain | MEIOB FAHD1 HAGH |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | RPUSD1 E4F1 SNORA78 IFT140 CCNF FAM173A JMJD8 AXIN1 SNORA64 NTN3 RHBDF1 SSTR5-AS1 NDUFB10 PKD1 CLCN7 MPG MIR6767 DECR2 MSLN IGFALS NHLRC4 LOC729652 LINC00254 DNASE1L2 CHTF18 CRAMP1 RAB11FIP3 LOC105371184 HAGHL LOC106660606 MIR940 ECI1 MIR6859-4 PRR25 RAB26 STUB1 TRAF7 NARFL LMF1-AS1 FBXL16 SPSB3 PIGQ FAHD1 MRPL28 MCRIP2 WASIR2 C16orf91 FAM234A LOC105371046 ZNF598 HBA1 CACNA1H MIR662 MIR4717 TBC1D24 NPRL3 PRSS29P PDIA2 BAIAP3 LOC105371038 DDX11L10 PRR35 NTHL1 MIR5587 LOC100287175 BRICD5 SYNGR3 LOC100134368 NPW HAGH MAPK8IP3 LOC101929280 GNG13 SOX8 TMEM204 MLST8 METTL26 TPSB2 RGS11 ATP6V0C LOC107984876 MIR3180-5 LOC105371045 MIR3176 KCTD5 MEIOB MIR6768 NME3 PRSS27 ARHGDIG FLJ42627 RNPS1 MIR3677 MIR3177 SNRNP25 LUC7L HBM PGP CASKIN1 TPSD1 RPL3L CEMP1 RNF151 LOC652276 RAB40C RHBDL1 LOC105371047 METRN UNKL SNORD60 NUBP2 LOC107987233 ABCA3 ERVK13-1 C1QTNF8 SLC9A3R2 AMDHD2 WDR24 NOXO1 HN1L EME2 MIR4516 SNHG19 TBL3 WDR90 TMEM8A SNORA10 MIR6511B1 GNPTG GFER LMF1 RPL23AP5 TSR3 NME4 WFIKKN1 PDPK1 MIR3178 CAPN15 MIR1225 SNHG9 PTX4 TELO2 RPS2 MRPS34 C16orf59 HBQ1 TPSAB1 HBA2 CCDC78 HBZ TPSG1 UBE2I ABCA17P RHOT2 LINC00235 POLR3K TSC2 SSTR5 MSRB1 LOC105371049 CCDC154 HS3ST6 |
nsv1051692 | Chr.16:1505070 - 1866102 on Build GRCh38 | Loss | LOC105371046 MEIOB IFT140 NME3 LOC105371047 NUBP2 MIR3177 HAGH MAPK8IP3 IGFALS SPSB3 FAHD1 TMEM204 TELO2 HN1L EME2 MRPS34 CRAMP1 |
nsv1042986 | Chr.16:1784723 - 1866102 on Build GRCh38 | Loss | MEIOB IGFALS FAHD1 NUBP2 HAGH |
nsv457337 | Chr.16:1813519 - 1855005 on Build GRCh38 | Loss | MEIOB FAHD1 HAGH |
nsv571177 | Chr.16:1817039 - 1897015 on Build GRCh38 | Gain | MEIOB FAHD1 LINC00254 HAGH |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |