Assay Details
Target Gene Details
Entrez Gene ID: | 2583 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 1 |
Gene Aliases: |
GALGT, GALNACT, GalNAc-T, SPG26 |
Location: |
Chr.12:57623409-57633239 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT1 | NM_001276468.1 | 10 | 1567 | NP_001263397.1 |
NM_001478.4 | 11 | 2059 | NP_001469.1 | |
XM_005268773.4 | 11 | 2052 | XP_005268830.1 | |
XM_011538147.2 | 12 | 2070 | XP_011536449.1 | |
XM_011538148.2 | 12 | 2037 | XP_011536450.1 | |
XM_017019140.1 | 11 | 2154 | XP_016874629.1 | |
XM_017019141.1 | 11 | 1866 | XP_016874630.1 | |
XM_017019142.1 | 11 | 1731 | XP_016874631.1 | |
AB209460.1 | 10 | 2234 | BAD92697.1 | |
AK127448.1 | 2 | 1954 | ||
AK293432.1 | 10 | 1533 | ||
M83651.1 | 11 | 1650 | AAA35516.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | MYO1A IL23A DTX3 INHBC TIMELESS NAB2 SLC39A5 STAC3 PAN2 ZBTB39 HBCBP PTGES3 HSD17B6 COQ10A INHBE GPR182 NXPH4 LRP1-AS B4GALNT1 NEMP1 DDIT3 SHMT2 GLS2 SLC26A10 SDR9C7 ARHGEF25 BAZ2A MIR616 MBD6 ANKRD52 RNF41 CNPY2 R3HDM2 CS APOF PRIM1 GLI1 ARHGAP9 DCTN2 STAT2 LOC101927583 SPRYD4 MARS PIP4K2C SNORA105C MIR6758 NACA TAC3 KIF5A MIP NDUFA4L2 RBMS2 SNORD59B NABP2 STAT6 OS9 RDH16 LRP1 ATP5B MIR1228 SNORD59A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |