Assay Details
Target Gene Details
Entrez Gene ID: | 388428 |
Gene Name: | AATK antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:81165507-81183164 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AATK-AS1 | NR_027255.1 | 3 | 478 | |
AK126811.1 | 3 | 478 | BAC86704.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | LOC107985022 MIR6786 MIR1250 MIR4740 TSPAN10 SLC25A10 LOC105371925 C17orf89 AATK LOC100129503 LOC400627 TEPSIN MIR338 AATK-AS1 BAIAP2-AS1 BAIAP2 FAAP100 ACTG1 LOC100130370 OXLD1 ARL16 LOC107985021 LOC105371921 LOC101928855 MIR657 TMEM105 NPLOC4 FSCN2 HGS PDE6G SLC38A10 MIR3065 LINC00482 BAHCC1 CHMP6 MIR3186 RPTOR MRPL12 CEP131 CCDC137 |
nsv1057306 | Chr.17:81154954 - 81207813 on Build GRCh38 | Loss | AATK AATK-AS1 CEP131 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | CCDC57 MIR6786 WDR45B FOXK2 MIR4740 TSPAN10 HEXDC SLC16A3 GCGR SLC25A10 CD7 LOC105371925 NARF TEPSIN C17orf62 OGFOD3 NPB DUS1L NOTUM CSNK1D FAAP100 FN3KRP ACTG1 DCXR ANAPC11 LRRC45 LOC101929552 NPLOC4 FSCN2 MIR4525 RFNG LINC00482 BAHCC1 MAFG-AS1 MIR3186 MRPL12 CEP131 FASN MYADML2 ARHGDIA ASPSCR1 PCYT2 PPP1R27 LOC105376791 SECTM1 UTS2R C17orf89 SIRT7 AATK SNORD134 TEX19 MIR6787 STRA13 LOC105371944 AATK-AS1 MAFG MCRIP1 ZNF750 LOC100130370 OXLD1 LOC105376790 B3GNTL1 ARL16 LOC101929511 P4HB TMEM105 RAC3 GPS1 PYCR1 HGS PDE6G SLC38A10 RAB40B FN3K ALYREF CCDC137 TBCD |
dgv46n68 | Chr.17:81133921 - 81288932 on Build GRCh38 | Loss | LOC105371925 C17orf89 AATK SLC38A10 TEPSIN AATK-AS1 CEP131 |
nsv1065052 | Chr.17:81080876 - 81204920 on Build GRCh38 | Gain | MIR657 AATK MIR3065 MIR1250 MIR338 AATK-AS1 CEP131 BAIAP2 |
nsv470619 | Chr.17:81032233 - 81349843 on Build GRCh38 | Loss | MIR1250 LOC105371925 MIR657 TMEM105 C17orf89 AATK SLC38A10 MIR3065 TEPSIN MIR338 LINC00482 AATK-AS1 CEP131 BAIAP2-AS1 BAIAP2 |
dgv3292n100 | Chr.17:81019582 - 81204920 on Build GRCh38 | Gain | MIR657 AATK MIR3065 MIR1250 MIR338 AATK-AS1 CEP131 BAIAP2-AS1 BAIAP2 |
nsv1064123 | Chr.17:81168449 - 81282457 on Build GRCh38 | Gain | LOC105371925 C17orf89 SLC38A10 TEPSIN AATK-AS1 CEP131 |
nsv952389 | Chr.17:81137501 - 81593774 on Build GRCh38 | Deletion | FAAP100 ACTG1 LOC100130370 MIR4740 LOC105371925 TMEM105 C17orf89 AATK NPLOC4 FSCN2 SLC38A10 TEPSIN LINC00482 BAHCC1 MIR3186 AATK-AS1 CEP131 |
nsv1066947 | Chr.17:81094837 - 81181290 on Build GRCh38 | Loss | MIR657 AATK MIR3065 MIR1250 MIR338 AATK-AS1 BAIAP2 |
More Information
Additional Information:
For this assay, SNP(s) [rs112222853] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |