Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 9 - Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3625074 | Chr.11:669311 - 702135 on Build GRCh38 | Loss | DEAF1 TMEM80 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | CRACR2B SLC25A22 CHID1 RNH1 CD151 SIGIRR MUC2 PKP3 LOC101059906 MIR210 RPLP2 PHRF1 CEND1 LOC143666 TALDO1 SNORA52 LOC101927503 PIDD1 MUC6 LRRC56 LOC171391 CDHR5 PTDSS2 DRD4 B4GALNT4 ANO9 HRAS EPS8L2 MIR6744 PDDC1 MIR210HG DEAF1 MUC5AC RASSF7 TMEM80 LMNTD2 TOLLIP IRF7 MUC5B PNPLA2 TSPAN4 AP2A2 PANO1 SCT POLR2L |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | EPS8L2 DEAF1 DRD4 TMEM80 TALDO1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | CRACR2B SLC25A22 CHID1 RNH1 CD151 SIGIRR TOLLIP-AS1 MUC2 LOC101059906 MIR210 RPLP2 PHRF1 CEND1 LOC143666 TALDO1 SNORA52 LOC101927503 PIDD1 MUC6 LRRC56 LOC171391 CDHR5 PTDSS2 DRD4 ANO9 HRAS EPS8L2 MIR6744 PDDC1 MIR210HG DEAF1 MUC5AC RASSF7 TMEM80 LMNTD2 TOLLIP IRF7 MUC5B PNPLA2 TSPAN4 AP2A2 PANO1 SCT POLR2L |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | RNH1 MIR210HG DEAF1 LOC101059906 MIR210 PHRF1 RASSF7 LOC143666 LMNTD2 IRF7 LRRC56 CDHR5 PTDSS2 DRD4 SCT HRAS |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | CRACR2B SLC25A22 CHID1 RNH1 CD151 SIGIRR PKP3 LOC101059906 MIR210 RPLP2 PHRF1 CEND1 LOC143666 TALDO1 SNORA52 PIDD1 LRRC56 LOC171391 CDHR5 PTDSS2 DRD4 B4GALNT4 ANO9 HRAS EPS8L2 PDDC1 MIR210HG DEAF1 RASSF7 TMEM80 LMNTD2 IRF7 PNPLA2 TSPAN4 AP2A2 PANO1 SCT POLR2L |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | CRACR2B SLC25A22 CHID1 RNH1 CD151 LOC101059906 MIR210 RPLP2 PHRF1 CEND1 LOC143666 TALDO1 SNORA52 PIDD1 LRRC56 LOC171391 CDHR5 PTDSS2 DRD4 HRAS EPS8L2 PDDC1 MIR210HG DEAF1 RASSF7 TMEM80 LMNTD2 IRF7 PNPLA2 TSPAN4 PANO1 SCT POLR2L |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |