Assay Details
Target Gene Details
Entrez Gene ID: | 144423 |
Gene Name: | glycosyltransferase 1 domain containing 1 |
Gene Aliases: |
- |
Location: |
Chr.12:128853323-128984964 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 3 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GLT1D1 | NM_144669.2 | NP_653270.1 | ||
NR_133646.1 | ||||
XM_005253553.4 | XP_005253610.2 | |||
XM_011537956.2 | XP_011536258.2 | |||
XM_011537957.2 | XP_011536259.1 | |||
XM_017018855.1 | XP_016874344.1 | |||
XM_017018856.1 | XP_016874345.1 | |||
XM_017018857.1 | XP_016874346.1 | |||
XM_017018858.1 | XP_016874347.1 | |||
XM_017018859.1 | XP_016874348.1 | |||
XM_017018860.1 | XP_016874349.1 | |||
XM_017018861.1 | XP_016874350.1 | |||
AK056540.1 | BAB71209.1 | |||
AK295333.1 | ||||
AK295454.1 | ||||
BC043528.1 | AAH43528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3631153 | Chr.12:128855742 - 128901072 on Build GRCh38 | Gain | GLT1D1 |
esv2759920 | Chr.12:128587760 - 128896765 on Build GRCh38 | Loss | LOC101929984 SLC15A4 GLT1D1 TMEM132C LOC100128276 |
nsv1040831 | Chr.12:128749443 - 129516029 on Build GRCh38 | Gain | LOC101929984 SLC15A4 GLT1D1 TMEM132D LOC100128276 LOC283352 LOC101927735 |
nsv832549 | Chr.12:128739165 - 128936554 on Build GRCh38 | Loss | LOC101929984 SLC15A4 GLT1D1 LOC100128276 |
nsv560689 | Chr.12:128840393 - 129063666 on Build GRCh38 | Gain | LOC101929984 GLT1D1 LOC100128276 |
More Information
Additional Information:
For this assay, SNP(s) [rs73440307] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |