Hs01021470_cn

• Gene Symbol: DDX41
• Assay Reference Genome Location: Chr.5:177511637 on build GRCh38
• Cytoband: 5q35.3

Target Gene Details

• Entrez Gene ID: 51428
• Gene Name: DEAD-box helicase 41
• Gene Aliases: ABS, MPLPF
• Location: Chr.5:177511577-177517326 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX41	NM_001321732.1	16	2681	NP_001308661.1
	NM_001321830.1	17	2473	NP_001308759.1
	NM_016222.3	17	2404	NP_057306.2
	AF195417.1	17	2021	AAF04150.1
	AK001255.1	17	2029	BAA91585.1
	AK026117.1	10	1346
	AK027768.1	17	2039	BAB55355.1
	AK091545.1	13	3030
	AK091774.1	16	2316
	AK092585.1	13	2891
	AK222598.1			BAD96318.1
	AL137455.1	7	878	CAB70746.1
	BC015476.1	17	2044	AAH15476.1
	BX641072.1	15	2087	CAE46035.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv5147	Chr.5:177511195 - 177556017 on Build GRCh38	Deletion	FAM193B DDX41
nsv1161311	Chr.5:177305104 - 177546474 on Build GRCh38	Duplication	GRK6 F12 DDX41 SLC34A1 PRELID1 RGS14 PRR7-AS1 MXD3 FAM193B LMAN2 PDLIM7 DBN1 PFN3 PRR7 DOK3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
apoptotic process
cell proliferation
RNA secondary structure unwinding
cell differentiation
regulation of type I interferon production
positive regulation of type I interferon production
cellular response to interferon-beta
positive regulation of transcription from RNA polymerase II promoter
defense response to virus

Function(s)

DNA binding
ATP-dependent RNA helicase activity
protein binding
ATP binding
poly(A) RNA binding
metal ion binding