Assay Details
Target Gene Details
Entrez Gene ID: | 2583 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 1 |
Gene Aliases: |
GALGT, GALNACT, GalNAc-T, SPG26 |
Location: |
Chr.12:57623409-57633239 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT1 | NM_001276468.1 | 10 | 2078 | NP_001263397.1 |
NM_001478.4 | 11 | 2570 | NP_001469.1 | |
XM_005268773.4 | 11 | 2563 | XP_005268830.1 | |
XM_011538147.2 | 12 | 2581 | XP_011536449.1 | |
XM_011538148.2 | 12 | 2548 | XP_011536450.1 | |
XM_017019140.1 | 11 | 2665 | XP_016874629.1 | |
XM_017019141.1 | 11 | 2377 | XP_016874630.1 | |
XM_017019142.1 | 11 | 2242 | XP_016874631.1 | |
AB209460.1 | 10 | 2745 | BAD92697.1 | |
AK127448.1 | 2 | 2465 | ||
M83651.1 | 11 | 2161 | AAA35516.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | OS9 RNF41 HBCBP GLS2 SLC26A10 CS INHBC SNORA105C R3HDM2 ARHGEF25 DDIT3 ATP5B NEMP1 PRIM1 GPR182 RDH16 LOC101927583 GLI1 DTX3 SLC39A5 PIP4K2C PTGES3 MIR1228 NDUFA4L2 STAC3 RBMS2 STAT6 CNPY2 HSD17B6 MIR6758 BAZ2A NAB2 LRP1-AS ARHGAP9 SHMT2 MARS SNORD59B LRP1 PAN2 APOF NABP2 TAC3 IL23A SDR9C7 MYO1A KIF5A MIP COQ10A MBD6 TIMELESS INHBE NACA MIR616 ANKRD52 SNORD59A SPRYD4 NXPH4 B4GALNT1 DCTN2 ZBTB39 STAT2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |