Assay Details
Target Gene Details
Entrez Gene ID: | 10362 |
Gene Name: | high mobility group 20B |
Gene Aliases: |
BRAF25, BRAF35, HMGX2, HMGXB2, PP7706, SMARCE1r, SOXL, pp8857 |
Location: |
Chr.19:3572938-3579083 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 1 - Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HMG20B | NM_006339.2 | NP_006330.2 | ||
XM_017026144.1 | XP_016881633.1 | |||
AF318366.1 | AAL55873.1 | |||
AK289500.1 | ||||
AK314201.1 | ||||
BC002552.2 | AAH02552.1 | |||
BC003505.1 | AAH03505.2 | |||
BI561304.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv961165 | Chr.19:3567351 - 3579402 on Build GRCh38 | Duplication | HMG20B |
nsv953948 | Chr.19:3171703 - 3700002 on Build GRCh38 | Deletion | FZR1 CELF5 NCLN NFIC DOHH CACTIN S1PR4 PIP5K1C MFSD12 CACTIN-AS1 HMG20B C19orf71 GIPC3 TBXA2R SMIM24 |
nsv833713 | Chr.19:3564423 - 3627361 on Build GRCh38 | Loss | CACTIN-AS1 HMG20B GIPC3 TBXA2R CACTIN |
nsv470114 | Chr.19:3372516 - 3855979 on Build GRCh38 | Loss | FZR1 NFIC DOHH CACTIN PIP5K1C TJP3 MFSD12 CACTIN-AS1 HMG20B C19orf71 GIPC3 TBXA2R MATK RAX2 MRPL54 SMIM24 APBA3 ZFR2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |