Hs00942919_cn

• Gene Symbol: LOXL1
• Assay Reference Genome Location: Chr.15:73927345 on build GRCh38
• Cytoband: 15q24.1

Target Gene Details

• Entrez Gene ID: 4016
• Gene Name: lysyl oxidase like 1
• Gene Aliases: LOL, LOXL
• Location: Chr.15:73926451-73952141 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOXL1	NM_005576.3	1	888	NP_005567.2
	XM_011521555.1	1	895	XP_011519857.1
	AK303982.1	2	492
	AK314222.1	1	886
	AL529650.3	1	914
	BC015090.2	1	867	AAH15090.1
	BC068542.1	1	888	AAH68542.1
	L21186.1	1	867	AAA50162.1

Target Gene Details

• Entrez Gene ID: 100287616
• Gene Name: LOXL1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.15:73917468-73928248 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOXL1-AS1	NR_040066.1
	NR_040067.1
	NR_040068.1
	NR_040069.1
	NR_040070.1
	AK056376.1
	AK056885.1
	BX355383.2
	BX366015.2
	DA021396.1
	DA038997.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1604	Chr.15:73903279 - 73936860 on Build GRCh38	Insertion	LOXL1 LOXL1-AS1 TBC1D21
nsv1603	Chr.15:73898881 - 73943392 on Build GRCh38	Deletion	LOXL1 LOXL1-AS1 TBC1D21
esv2760040	Chr.15:73922773 - 74172575 on Build GRCh38	Gain+Loss	LOXL1 ISLR2 LOC732265 LOC283731 STOML1 GOLGA6A LOXL1-AS1 PML
nsv1121512	Chr.15:72670085 - 75273877 on Build GRCh38	Deletion	C15orf59 EDC3 ULK3 SEMA7A SCAMP2 LOXL1 CSK LOC283731 MIR4513 GOLGA6A CYP11A1 CD276 REC114 GOLGA6C ARID3B CCDC33 UBL7-AS1 LMAN1L LOC107984728 ADPGK-AS1 SCAMP5 TBC1D21 CLK3 ISLR MIR6882 ISLR2 LOXL1-AS1 LOC729739 NPTN HIGD2B C15orf59-AS1 LOC732265 ADPGK C15orf39 LOC105376731 FAM219B CYP1A2 NPTN-IT1 NEO1 CYP1A1 RPP25 MIR6881 CPLX3 COX5A LOC102723750 UBL7 PML HCN4 STRA6 BBS4 STOML1 LOC101929333 MPI PPCDC

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Process(es)

protein deamination
extracellular matrix organization
response to lipopolysaccharide
aorta development
oxidation-reduction process

Function(s)

copper ion binding
oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor