Assay Details
Target Gene Details
Entrez Gene ID: | 56949 |
Gene Name: | XPA binding protein 2 |
Gene Aliases: |
HCNP, HCRN, NTC90, SYF1 |
Location: |
Chr.19:7619525-7629553 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
XAB2 | NM_020196.2 | NP_064581.2 | ||
AB026111.1 | BAB15807.1 | |||
AF226051.1 | AAF86951.1 | |||
AF258567.1 | AAG23770.1 | |||
AF272147.1 | AAQ14304.1 | |||
AK074035.1 | 1 | 101 | BAB84861.1 | |
BC007208.1 | AAH07208.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv953958 | Chr.19:7584715 - 7650814 on Build GRCh38 | Deletion | STXBP2 PCP2 XAB2 MIR6792 CAMSAP3 PET100 |
nsv833731 | Chr.19:7589114 - 7739331 on Build GRCh38 | Loss | STXBP2 PCP2 XAB2 RETN MIR6792 MCEMP1 CAMSAP3 TRAPPC5 FCER2 PET100 CLEC4G |
nsv1060887 | Chr.19:7089546 - 7861087 on Build GRCh38 | Gain | CD209 XAB2 LOC100128573 CLEC4GP1 RETN MIR6792 PNPLA6 TRAPPC5 LOC107985283 EVI5L FCER2 PET100 ARHGEF18 ZNF358 C19orf45 STXBP2 PCP2 MCOLN1 INSR MCEMP1 CLEC4M CAMSAP3 PEX11G CLEC4G |
esv993190 | Chr.19:7615627 - 7629366 on Build GRCh38 | Deletion | XAB2 MIR6792 CAMSAP3 |
nsv833730 | Chr.19:7509505 - 7633597 on Build GRCh38 | Loss | ZNF358 PCP2 MCOLN1 XAB2 MIR6792 CAMSAP3 PNPLA6 PET100 |
esv2751809 | Chr.19:6896369 - 7816144 on Build GRCh38 | Gain | LOC729458 MBD3L3 LOC100128573 RETN MIR6792 TRAPPC5 LOC107985283 PET100 ARHGEF18 ADGRE1 ZNF358 C19orf45 PCP2 MBD3L5 CLEC4M ADGRE4P ZNF557 CD209 XAB2 CLEC4GP1 PNPLA6 FCER2 MBD3L4 STXBP2 FLJ25758 MCOLN1 INSR MCEMP1 MBD3L2 CAMSAP3 PEX11G CLEC4G |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |