Assay Details
Target Gene Details
Entrez Gene ID: | 5698 |
Gene Name: | proteasome subunit beta 9 |
Gene Aliases: |
LMP2, PSMB6i, RING12, beta1i |
Location: |
Chr.6:32854161-32859851 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PSMB9 | NM_002800.4 | NP_002791.1 | ||
AK303118.1 | ||||
BC065513.1 | AAH65513.1 | |||
BI832878.1 | ||||
BM998687.1 | ||||
BX641100.1 | ||||
CR541656.1 | CAG46457.1 | |||
S75169.1 | AAC60646.1 | |||
U01025.1 | AAC50154.1 | |||
X62741.1 | CAA44603.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1073969 | Chr.6:31456422 - 33480523 on Build GRCh38 | Deletion | LOC102725068 LY6G6C C4A MIR5004 HLA-DMA FKBPL DAXX TAP2 BRD2 MIR6833 SNORD52 PFDN6 MIR1236 NOTCH4 ATP6V1G2-DDX39B LY6G6F CSNK2B SNORA38 ATP6V1G2 HLA-DOB C4B MCCD1 RGL2 AGER MIR219A1 HLA-DMB LOC100287329 GPSM3 MIR6834 LY6G5B LY6G5C MIR4646 SNORD84 ZBTB22 BAG6 HSPA1A TNF TNXB PPT2 HSPA1L ZBTB9 MSH5-SAPCD1 SKIV2L C2 RPS18 MICB WDR46 VPS52 COL11A2 CFB PBX2 MIR6721 LOC100294145 HSPA1B CYP21A1P SAPCD1-AS1 PRRT1 APOM LOC101929163 C6orf10 EGFL8 PRRC2A LTA LOC100507547 HLA-DRB1 TAP1 PSMB9 PPP1R2P1 LTB PPT2-EGFL8 ATF6B HLA-DRB5 SYNGAP1 PHF1 RING1 VWA7 KIFC1 GPANK1 DDX39B HLA-DPA1 TAPBP MSH5 HCG25 C6orf25 SNORD117 LSM2 MIR6832 ZBTB12 DDAH2 DDX39B-AS1 CYP21A2 SNORD48 HLA-DOA NELFE HLA-DRB6 MIR6873 ABHD16A SLC44A4 NCR3 HCG26 STK19 SLC39A7 HCG23 AGPAT1 VARS C6orf47 NFKBIL1 CUTA SAPCD1 LY6G6D CLIC1 HLA-DQA1 HCG24 HLA-DQB2 PSMB8 C6orf48 RNF5 MIR3135B LST1 TNXA HLA-DQB1 C2-AS1 DXO EHMT2 AIF1 HLA-DQB1-AS1 LY6G6E HCP5 HLA-DPB2 PSMB8-AS1 B3GALT4 NEU1 HLA-DPB1 BTNL2 HLA-DQA2 HLA-DRA HSD17B8 RXRB |
nsv1112900 | Chr.6:31455323 - 33480423 on Build GRCh38 | Deletion | LOC102725068 LY6G6C C4A MIR5004 HLA-DMA FKBPL DAXX TAP2 BRD2 MIR6833 SNORD52 PFDN6 MIR1236 NOTCH4 ATP6V1G2-DDX39B LY6G6F CSNK2B SNORA38 ATP6V1G2 HLA-DOB C4B MCCD1 RGL2 AGER MIR219A1 HLA-DMB LOC100287329 GPSM3 MIR6834 LY6G5B LY6G5C MIR4646 SNORD84 ZBTB22 BAG6 HSPA1A TNF TNXB PPT2 HSPA1L ZBTB9 MSH5-SAPCD1 SKIV2L C2 RPS18 MICB WDR46 VPS52 COL11A2 CFB PBX2 MIR6721 LOC100294145 HSPA1B CYP21A1P SAPCD1-AS1 PRRT1 APOM LOC101929163 C6orf10 EGFL8 PRRC2A LTA LOC100507547 HLA-DRB1 TAP1 PSMB9 PPP1R2P1 LTB PPT2-EGFL8 ATF6B HLA-DRB5 SYNGAP1 PHF1 RING1 VWA7 KIFC1 GPANK1 DDX39B HLA-DPA1 TAPBP MSH5 HCG25 C6orf25 SNORD117 LSM2 MIR6832 ZBTB12 DDAH2 DDX39B-AS1 CYP21A2 SNORD48 HLA-DOA NELFE HLA-DRB6 MIR6873 ABHD16A SLC44A4 NCR3 HCG26 STK19 SLC39A7 HCG23 AGPAT1 VARS C6orf47 NFKBIL1 CUTA SAPCD1 LY6G6D CLIC1 HLA-DQA1 HCG24 HLA-DQB2 PSMB8 C6orf48 RNF5 MIR3135B LST1 TNXA HLA-DQB1 C2-AS1 DXO EHMT2 AIF1 HLA-DQB1-AS1 LY6G6E HCP5 HLA-DPB2 PSMB8-AS1 B3GALT4 NEU1 HLA-DPB1 BTNL2 HLA-DQA2 HLA-DRA HSD17B8 RXRB |
nsv830633 | Chr.6:32829085 - 32995634 on Build GRCh38 | Loss | PSMB8-AS1 TAP2 PPP1R2P1 HLA-DMB BRD2 LOC100294145 TAP1 HLA-DMA PSMB9 PSMB8 |
nsv1119076 | Chr.6:32595823 - 33480623 on Build GRCh38 | Deletion | ZBTB22 PPP1R2P1 SLC39A7 MIR5004 SYNGAP1 HLA-DMA PHF1 ZBTB9 RING1 DAXX TAP2 KIFC1 CUTA BRD2 PFDN6 HLA-DQA1 RPS18 HCG24 HLA-DPA1 TAPBP HLA-DQB2 PSMB8 WDR46 VPS52 COL11A2 HCG25 MIR3135B HLA-DQB1 HLA-DOB LOC100294145 HLA-DQB1-AS1 RGL2 HLA-DPB2 PSMB8-AS1 MIR219A1 B3GALT4 HLA-DPB1 HLA-DMB MIR6834 HLA-DQA2 HLA-DOA TAP1 HSD17B8 PSMB9 MIR6873 RXRB |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |