Assay Details
Target Gene Details
Entrez Gene ID: | 7551 |
Gene Name: | zinc finger protein 3 |
Gene Aliases: |
A8-51, HF.12, KOX25, PP838, Zfp113 |
Location: |
Chr.7:100063847-100082548 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ZNF3 | NM_001318137.1 | 4 | 962 | NP_001305066.1 |
NM_017715.3 | 6 | 1214 | NP_060185.2 | |
AF193057.1 | 6 | 1177 | AAG22485.1 | |
AF217988.1 | 6 | 1178 | AAG17231.1 | |
AK000223.1 | 5 | 1157 | BAA91019.1 | |
AK123799.1 | 1 | 1307 |
Target Gene Details
Entrez Gene ID: | 7589 |
Gene Name: | zinc finger and SCAN domain containing 21 |
Gene Aliases: |
NY-REN-21, ZNF38, Zipro1 |
Location: |
Chr.7:100049770-100065041 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ZSCAN21 | NM_145914.2 | 4 | 1246 | NP_666019.1 |
XM_005250568.4 | 5 | 2388 | XP_005250625.1 | |
XM_006716113.3 | 4 | 2227 | XP_006716176.1 | |
XM_017012584.1 | 5 | 2352 | XP_016868073.1 | |
XM_017012585.1 | 5 | 1167 | XP_016868074.1 | |
AF155100.1 | 3 | 921 | AAD42866.1 | |
AK075324.1 | 6 | 1243 | ||
AK292267.1 | 4 | 1266 | ||
AK301871.1 | 6 | 1297 | ||
AK313884.1 | 4 | 1264 | ||
AL136865.1 | 3 | 1199 | CAB66799.1 | |
BC033129.1 | 1 | 371 | AAH33129.1 | |
BC047309.1 | 4 | 1239 | AAH47309.1 | |
CR749301.1 | 5 | 1130 | CAH18156.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469687 | Chr.7:99974920 - 100157518 on Build GRCh38 | Loss | COPS6 AP4M1 MCM7 TAF6 MIR106B MIR4658 MIR25 MBLAC1 MIR93 ZSCAN21 AZGP1P1 ZNF3 ZKSCAN1 CNPY4 AZGP1 C7orf43 LAMTOR4 |
esv2734888 | Chr.7:99975623 - 101290285 on Build GRCh38 | Deletion | SRRT TRIM56 SLC12A9 ZCWPW1 LRCH4 MIR4658 MIR25 NYAP1 SAP25 STAG3L5P MIR93 PCOLCE-AS1 AZGP1P1 MEPCE CNPY4 ZNHIT1 C7orf43 LOC105375429 LAMTOR4 TRIP6 ZASP POP7 PLOD3 CLDN15 LOC102724094 MUC3A MIR4653 ZSCAN21 ACTL6B MIR6840 ZNF3 PPP1R35 MIR6875 NAT16 COPS6 AP1S1 AP4M1 PCOLCE TAF6 STAG3L5P-PVRIG2P-PILRB PILRA PILRB MUC12 UFSP1 STAG3 VGF PMS2P1 PVRIG2P AZGP1 PVRIG EPO GAL3ST4 FIS1 FBXO24 MCM7 SERPINE1 MIR106B TSC22D4 C7orf61 MOGAT3 MUC17 GPC2 ACHE MBLAC1 AGFG2 EPHB4 ZAN ZKSCAN1 GATS GNB2 GIGYF1 TFR2 SPDYE3 MOSPD3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |