Assay Details
Target Gene Details
Entrez Gene ID: | 100289580 |
Gene Name: | uncharacterized LOC100289580 |
Gene Aliases: |
- |
Location: |
Chr.16:88731180-88741425 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100289580 | NR_103774.1 | 2 | 563 | |
AK127064.1 | 1 | 1315 | ||
AK294743.1 | 2 | 563 |
Target Gene Details
Entrez Gene ID: | 9780 |
Gene Name: | piezo type mechanosensitive ion channel component 1 |
Gene Aliases: |
DHS, FAM38A, LMPH3, Mib |
Location: |
Chr.16:88715338-88785220 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 7 - Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIEZO1 | NM_001142864.3 | NP_001136336.2 | ||
DV080349.1 | ||||
DV080374.1 | ||||
KC602455.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain | GALNS CBFA2T3 LOC400558 LOC339059 LINC00304 LOC100129697 TRAPPC2L LOC107987238 PABPN1L CTU2 LOC101927793 CDT1 SLC22A31 PIEZO1 LOC105371409 MIR4722 ACSF3 ZNF778 LOC100289580 APRT CDH15 |
nsv471114 | Chr.16:88688461 - 88756339 on Build GRCh38 | Gain | PIEZO1 LOC339059 MIR4722 CTU2 LOC100289580 RNF166 |
nsv471113 | Chr.16:88650665 - 88764428 on Build GRCh38 | Loss | SNAI3-AS1 PIEZO1 LOC339059 MVD CYBA MIR4722 SNAI3 CTU2 LOC100289580 RNF166 |
dgv3064n100 | Chr.16:88683753 - 88846491 on Build GRCh38 | Gain | GALNS CDT1 SNAI3-AS1 PIEZO1 LOC339059 MIR4722 SNAI3 LOC107987238 CTU2 LOC100289580 RNF166 APRT |
nsv517643 | Chr.16:88713767 - 88756339 on Build GRCh38 | Loss | PIEZO1 LOC339059 MIR4722 CTU2 LOC100289580 |
nsv833327 | Chr.16:88667431 - 88757621 on Build GRCh38 | Loss | SNAI3-AS1 PIEZO1 LOC339059 MIR4722 SNAI3 CTU2 LOC100289580 RNF166 |
nsv952070 | Chr.16:88257295 - 88780192 on Build GRCh38 | Deletion | LOC107984862 SNAI3-AS1 ZNF469 LOC339059 ZFPM1 SNAI3 CTU2 IL17C ZC3H18-AS1 PIEZO1 MVD CYBA MIR5189 MIR4722 LOC100289580 RNF166 ZC3H18 |
nsv1927 | Chr.16:88712585 - 88743583 on Build GRCh38 | Insertion | PIEZO1 LOC339059 MIR4722 CTU2 LOC100289580 |
nsv1160442 | Chr.16:88708161 - 88778524 on Build GRCh38 | Deletion | PIEZO1 LOC339059 MIR4722 CTU2 LOC100289580 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | SNORD68 AFG3L1P LOC100129697 SPATA33 TRAPPC2L PABPN1L LOC101927817 SPATA2L LOC105371409 CYBA ACSF3 LOC105371419 GALNS CBFA2T3 LOC400558 VPS9D1 SNAI3 LOC107987238 CHMP1A LOC101927793 LOC100287036 FAM157C URAHP TUBB3 ANKRD11 FANCA DPEP1 APRT CDH15 LOC105371414 CPNE7 SNAI3-AS1 LOC339059 LOC107984817 VPS9D1-AS1 SPIRE2 PRDM7 ZNF276 IL17C SPG7 CDK10 PIEZO1 MVD RPL13 GAS8-AS1 MIR4722 MC1R DBNDD1 RNF166 DEF8 GAS8 TUBB8P7 LINC00304 CENPBD1 CTU2 TCF25 CDT1 SLC22A31 ZNF778 LOC100289580 |
dgv3065n100 | Chr.16:88711587 - 88927172 on Build GRCh38 | Gain | GALNS CBFA2T3 LOC339059 TRAPPC2L LOC107987238 PABPN1L CTU2 LOC101927793 CDT1 PIEZO1 MIR4722 LOC100289580 APRT |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |