Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | 3 | 658 | NP_060831.2 |
XM_011534751.2 | 3 | 428 | XP_011533053.1 | |
AF375789.1 | 3 | 620 | AAK54809.1 | |
AK002072.1 | 3 | 322 | BAA92069.1 | |
AK310545.1 | ||||
AL136587.1 | 3 | 348 | CAB66522.1 | |
BC023550.2 | 3 | 602 | AAH23550.1 | |
BC068519.1 | 3 | 322 | AAH68519.1 | |
BC080537.1 | 3 | 627 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | AGPAT5 ANGPT2 XKR5 MIR4659A MCPH1 DEFA4 DEFA8P DEFB1 MIR4659B DEFA6 GS1-24F4.2 MCPH1-AS1 MIR8055 |
esv7258 | Chr.8:6730063 - 6730876 on Build GRCh38 | Loss | AGPAT5 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | DEFB1 MIR4659B GS1-24F4.2 AGPAT5 MCPH1-AS1 MIR8055 ANGPT2 XKR5 MIR4659A MCPH1 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MIR4659B AGPAT5 MCPH1-AS1 MIR8055 XKR5 MIR4659A MCPH1 |
esv2145090 | Chr.8:6730129 - 6730832 on Build GRCh38 | Deletion | AGPAT5 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | DEFB1 MIR4659B GS1-24F4.2 AGPAT5 MCPH1-AS1 MIR8055 ANGPT2 XKR5 MIR4659A MCPH1 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | DEFB1 MIR4659B GS1-24F4.2 AGPAT5 MCPH1-AS1 XKR5 MIR4659A |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA7P DEFA9P AGPAT5 DEFT1P DEFA10P DEFT1P2 DEFA1B XKR5 MIR4659A DEFA4 DEFA1 DEFA8P DEFB1 MIR4659B DEFA11P DEFA3 DEFA5 DEFA6 GS1-24F4.2 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFB106A DEFB103A OR7E125P AGPAT5 DEFB4A DEFT1P DEFA10P DEFB105A ZNF705B DEFA1B LINC00965 MIR4659A FAM66B DEFA4 DEFA1 MIR4659B DEFA5 SPAG11A LOC101928095 DEFB104B USP17L1 DEFB103B USP17L4 DEFB108P1 OR7E154P DEFB107A DEFB109P1B DEFB105B DEFB107B GS1-24F4.2 SPAG11B DEFA7P FAM66E LOC107986910 PRR23D1 DEFT1P2 DEFB4B FAM90A7P DEFB1 DEFA11P DEFA3 FAM90A10P DEFA9P PRR23D2 USP17L3 DEFB104A LOC101929400 USP17L8 ZNF705G DEFB106B XKR5 DEFA8P DEFA6 |
esv2546871 | Chr.8:6729668 - 6731302 on Build GRCh38 | Deletion | AGPAT5 |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MIR4659B AGPAT5 MCPH1-AS1 XKR5 MIR4659A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |