Assay Details
Target Gene Details
Entrez Gene ID: | 10717 |
Gene Name: | adaptor related protein complex 4 beta 1 subunit |
Gene Aliases: |
BETA-4, CPSQ5, SPG47 |
Location: |
Chr.1:113894194-113905202 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AP4B1 | NM_001253852.2 | 10 | 2312 | NP_001240781.1 |
NM_001253853.2 | 11 | 2237 | NP_001240782.1 | |
NM_001308312.1 | 7 | 1808 | NP_001295241.1 | |
NM_006594.4 | 11 | 2365 | NP_006585.2 | |
XM_011540523.2 | 10 | 2218 | XP_011538825.1 | |
XM_011540524.2 | 9 | 2052 | XP_011538826.1 | |
XM_011540525.2 | 9 | 2164 | XP_011538827.1 | |
XM_011540528.2 | 10 | 5070 | XP_011538830.1 | |
XM_017000088.1 | 10 | 4049 | XP_016855577.1 | |
XM_017000089.1 | 8 | 1848 | XP_016855578.1 | |
XM_017000090.1 | 8 | 1803 | XP_016855579.1 | |
XM_017000091.1 | 7 | 1852 | XP_016855580.1 | |
XM_017000092.1 | 11 | 2429 | XP_016855581.1 | |
AB209817.1 | 10 | 2249 | BAD93054.1 | |
AF092094.1 | 11 | 2309 | AAD20448.1 | |
AK001045.1 | 4 | 1817 | ||
AK057567.1 | 2 | 2548 | ||
AK093740.1 | 7 | 1713 | ||
AK300204.1 | 11 | 2076 | ||
AK314641.1 | 11 | 2269 | ||
AW072594.1 | ||||
BC014146.2 | 10 | 2170 | AAH14146.1 |
Target Gene Details
Entrez Gene ID: | 100287722 |
Gene Name: | AP4B1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.1:113812612-113901237 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AP4B1-AS1 | NR_037864.1 | |||
NR_125965.1 | ||||
AK123199.1 | ||||
DB028504.1 | ||||
DB074478.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3587251 | Chr.1:113871703 - 113936287 on Build GRCh38 | Loss |
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esv3587240 | Chr.1:113533246 - 114158910 on Build GRCh38 | Loss |
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esv23869 | Chr.1:113320330 - 114358495 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs201156296] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)