Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_001100812.1 | NP_001094282.1 | ||
NM_022059.3 | NP_071342.2 | |||
AF275260.1 | AAG31750.1 | |||
AF301016.1 | AAG34365.1 | |||
AF337812.1 | AAK38275.1 | |||
AK027389.1 | BAB55078.1 | |||
AK292114.1 | ||||
AK315017.1 | ||||
AY358909.1 | AAQ89268.1 | |||
BC017588.1 | AAH17588.1 | |||
BC044930.1 | AAH44930.1 | |||
CA307348.1 | ||||
JC209418.1 | ||||
JC209420.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | ZFP3 ALOX15 CXCL16 SLC52A1 RABEP1 ZMYND15 ZNF232 NUP88 SMTNL2 RNF167 DHX33 LOC100130950 MED11 INCA1 LOC101559451 SCIMP MIR6865 PLD2 USP6 ENO3 TM4SF5 MIR6864 PFN1 KIF1C LOC107984973 GLTPD2 PSMB6 C1QBP ARRB2 LOC101928000 RPAIN LOC102724009 SLC25A11 C17orf107 LOC400568 GP1BA MINK1 LOC101927979 CHRNE ZNF594 SPAG7 CAMTA2 VMO1 PELP1 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | LOC107984973 CXCL16 ZMYND15 GLTPD2 PSMB6 MED11 ARRB2 LOC101559451 MINK1 PLD2 VMO1 TM4SF5 PELP1 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | CXCL16 ZMYND15 MED11 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |