Assay Details
Target Gene Details
Entrez Gene ID: | 55911 |
Gene Name: | apolipoprotein B receptor |
Gene Aliases: |
APOB100R, APOB48R |
Location: |
Chr.16:28494649-28498970 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 1 - Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBR | NM_018690.3 | NP_061160.3 | ||
AF141332.1 | AAF76255.1 | |||
AF141334.1 | AAF78765.1 | |||
BC119786.1 | ||||
BC119788.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | CLN3 NUPR1 APOBR SULT1A1 SGF29 IL27 SULT1A2 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | RABEP2 LAT MIR6862-1 EIF3CL SGF29 ATP2A1-AS1 MIR4517 NPIP NUPR1 APOBR SH2B1 RRN3P2 SULT1A2 NPIPB9 NPIPB8 MIR6862-2 NPIPB6 ATXN2L NFATC2IP XPO6 MIR4721 SULT1A1 EIF3C TUFM ATP2A1 CD19 CLN3 LOC101928215 SBK1 SPNS1 IL27 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | RABEP2 LAT MIR6862-1 EIF3CL SGF29 ATP2A1-AS1 MIR4517 NPIP NUPR1 APOBR SH2B1 RRN3P2 SULT1A2 NPIPB9 NPIPB8 MIR6862-2 ATXN2L NFATC2IP MIR4721 SULT1A1 EIF3C TUFM ATP2A1 CD19 CLN3 LOC107984832 LOC101928215 SPNS1 IL27 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | CLN3 NPIPB6 NUPR1 APOBR MIR6862-1 EIF3CL SGF29 IL27 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |