Assay Details
Target Gene Details
Entrez Gene ID: | 8651 |
Gene Name: | suppressor of cytokine signaling 1 |
Gene Aliases: |
CIS1, CISH1, JAB, SOCS-1, SSI-1, SSI1, TIP3 |
Location: |
Chr.16:11254417-11256182 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SOCS1 | NM_003745.1 | 2 | 182 | NP_003736.1 |
AB000676.1 | BAA21537.1 | |||
AB000734.1 | 2 | 182 | BAA23521.1 | |
AB005043.1 | 1 | 81 | BAA22431.1 | |
AK127621.1 | 1 | 750 | ||
U88326.1 | 1 | 51 | AAB62401.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv827552 | Chr.16:11254286 - 11257684 on Build GRCh38 | Gain | SOCS1 |
esv23744 | Chr.16:11255187 - 11257087 on Build GRCh38 | Loss | SOCS1 |
nsv1040428 | Chr.16:10145408 - 11362136 on Build GRCh38 | Gain | PRM2 EMP2 LOC105371083 RMI2 TNP2 CIITA DEXI SOCS1 MIR548H2 TVP23A ATF7IP2 PRM1 LOC107984859 NUBP1 PRM3 TEKT5 CLEC16A GRIN2A |
nsv571453 | Chr.16:11218316 - 11302493 on Build GRCh38 | Loss | SOCS1 PRM2 PRM1 LOC107984859 PRM3 TNP2 |
nsv525548 | Chr.16:11169999 - 11272732 on Build GRCh38 | Loss | SOCS1 LOC107984859 CLEC16A TNP2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |