Assay Details
Target Gene Details
Entrez Gene ID: | 100526740 |
Gene Name: | ATP5J2-PTCD1 readthrough |
Gene Aliases: |
- |
Location: |
Chr.7:99416739-99466201 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ATP5J2-PTCD1 | NM_001198879.1 | NP_001185808.1 | ||
AK295912.1 |
Target Gene Details
Entrez Gene ID: | 10898 |
Gene Name: | cleavage and polyadenylation specific factor 4 |
Gene Aliases: |
CPSF30, NAR, NEB-1, NEB1 |
Location: |
Chr.7:99438920-99457377 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CPSF4 | NM_001081559.2 | 8 | 1320 | NP_001075028.1 |
NM_001318160.1 | 8 | 1317 | NP_001305089.1 | |
NM_001318161.1 | 7 | 1226 | NP_001305090.1 | |
NM_001318162.1 | 8 | 1295 | NP_001305091.1 | |
NM_006693.3 | 8 | 1395 | NP_006684.1 | |
XM_011515755.2 | 8 | 1414 | XP_011514057.1 | |
XM_011515756.2 | 8 | 1338 | XP_011514058.1 | |
XM_011515757.2 | 8 | 1337 | XP_011514059.1 | |
XM_017011700.1 | 7 | 3647 | XP_016867189.1 | |
XM_017011701.1 | 7 | 3632 | XP_016867190.1 | |
XM_017011702.1 | 9 | 1340 | XP_016867191.1 | |
XM_017011703.1 | 8 | 1234 | XP_016867192.1 | |
AA040394.1 | ||||
AI076832.1 | 1 | 437 | ||
AK301745.1 | 8 | 1250 | ||
BC003101.1 | 8 | 1235 | AAH03101.1 | |
BC050738.1 | AAH50738.1 | |||
BQ641871.1 | 1 | 483 | ||
U79569.1 | 8 | 1288 | AAD00321.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831069 | Chr.7:99350505 - 99529961 on Build GRCh38 | Loss | ARPC1A PTCD1 PDAP1 ATP5J2-PTCD1 CPSF4 ARPC1B ZKSCAN5 ZNF789 BUD31 ZNF394 ATP5J2 |
nsv951383 | Chr.7:99449178 - 99457377 on Build GRCh38 | Deletion | ATP5J2-PTCD1 CPSF4 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |