Assay Details
Target Gene Details
Entrez Gene ID: | 6472 |
Gene Name: | serine hydroxymethyltransferase 2 |
Gene Aliases: |
GLYA, HEL-S-51e, SHMT |
Location: |
Chr.12:57229573-57234935 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 7 - Intron 7 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | NEMP1 GLI1 SHMT2 SPRYD4 CS ATP5B PIP4K2C STAT6 B4GALNT1 ARHGEF25 SLC26A10 R3HDM2 BAZ2A MIP IL23A NAB2 TIMELESS APOF NACA NABP2 NDUFA4L2 INHBC MYO1A LRP1 OS9 HBCBP PTGES3 NXPH4 SLC39A5 MIR1228 CNPY2 ZBTB39 PAN2 RDH16 MIR616 INHBE SNORA105C COQ10A SNORD59B SNORD59A DCTN2 GLS2 LOC101927583 SDR9C7 ANKRD52 LRP1-AS HSD17B6 GPR182 MIR6758 KIF5A MBD6 MARS PRIM1 DTX3 TAC3 DDIT3 RNF41 ARHGAP9 STAC3 STAT2 RBMS2 |
nsv519293 | Chr.12:57189889 - 57243810 on Build GRCh38 | Loss | SHMT2 LRP1 STAC3 NDUFA4L2 NXPH4 MIR1228 |
nsv952189 | Chr.12:57127118 - 57245617 on Build GRCh38 | Deletion | SHMT2 LRP1 STAC3 NDUFA4L2 NXPH4 MIR1228 LRP1-AS |
dgv96n21 | Chr.12:57139199 - 57243810 on Build GRCh38 | Loss | SHMT2 LRP1 STAC3 NDUFA4L2 NXPH4 MIR1228 LRP1-AS |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |