Assay Details
Target Gene Details
Entrez Gene ID: | 57585 |
Gene Name: | cramped chromatin regulator homolog 1 |
Gene Aliases: |
CRAMP1L, HN1L, TCE4 |
Location: |
Chr.16:1614640-1677908 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CRAMP1 | NM_020825.3 | NP_065876.3 | ||
BC137172.1 | ||||
BC137173.1 | ||||
BE048705.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4856n54 | Chr.16:1600945 - 1813519 on Build GRCh38 | Loss | IFT140 NME3 LOC105371046 EME2 HN1L MAPK8IP3 MIR3177 IGFALS MRPS34 SPSB3 CRAMP1 NUBP2 HAGH |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | PDIA2 FAM234A CCDC78 MIR4516 SNHG19 WDR90 AMDHD2 MIR3176 SSTR5-AS1 LINC00235 LOC106660606 TPSD1 RAB11FIP3 TBC1D24 SNORA64 LOC101929280 NTN3 NDUFB10 HBA2 MIR3177 C1QTNF8 GFER LOC652276 MIR1225 RAB40C LOC107987233 GNPTG MSRB1 CLCN7 LOC105371038 RGS11 ATP6V0C DDX11L10 MIR3180-5 CASKIN1 MAPK8IP3 MIR4717 CCNF BRICD5 IGFALS LOC100287175 FBXL16 PRR35 HAGHL WFIKKN1 MIR5587 LOC105371046 LOC105371045 PRR25 MIR6767 MRPS34 ECI1 CRAMP1 FLJ42627 NME4 PRSS27 MIR3677 IFT140 TRAF7 NTHL1 HBQ1 CEMP1 CAPN15 FAM173A UNKL CHTF18 ABCA3 SOX8 RHBDF1 EME2 TSR3 MCRIP2 TMEM204 SNHG9 STUB1 LOC107984876 SYNGR3 PDPK1 WASIR2 FAHD1 SSTR5 MIR6768 NUBP2 PRSS29P KCTD5 RAB26 MPG PIGQ SLC9A3R2 AXIN1 HBM LMF1-AS1 RPUSD1 PGP TPSG1 METTL26 HBZ SPSB3 ZNF598 SNORA10 HBA1 NOXO1 MRPL28 RPL23AP5 MIR6859-4 HAGH MEIOB SNORD60 C16orf91 RHOT2 BAIAP3 MIR662 ERVK13-1 TSC2 SNRNP25 DNASE1L2 LOC100134368 NPW MIR3178 TPSAB1 PKD1 C16orf59 NPRL3 METRN WDR24 TELO2 SNORA78 TPSB2 NME3 RNPS1 MIR940 MLST8 LOC105371049 TBL3 LUC7L LOC105371047 ABCA17P JMJD8 MSLN E4F1 DECR2 RPL3L LINC00254 MIR6511B1 UBE2I ARHGDIG HS3ST6 NHLRC4 RNF151 LMF1 CACNA1H LOC729652 PTX4 GNG13 HN1L TMEM8A RPS2 CCDC154 LOC105371184 RHBDL1 POLR3K NARFL |
nsv1051692 | Chr.16:1505070 - 1866102 on Build GRCh38 | Loss | MEIOB IFT140 TELO2 NME3 LOC105371046 EME2 HN1L MAPK8IP3 LOC105371047 MIR3177 IGFALS TMEM204 MRPS34 SPSB3 CRAMP1 FAHD1 NUBP2 HAGH |
dgv4855n54 | Chr.16:1577507 - 1694025 on Build GRCh38 | Loss | HN1L IFT140 CRAMP1 LOC105371046 |
nsv428317 | Chr.16:1550716 - 1711581 on Build GRCh38 | Gain | HN1L MAPK8IP3 IFT140 TMEM204 CRAMP1 LOC105371046 |
nsv827496 | Chr.16:1589777 - 1638333 on Build GRCh38 | Gain | IFT140 CRAMP1 LOC105371046 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |