Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 2617 | NP_078903.3 |
AL832509.1 | 3 | 2506 | ||
BX640785.1 | 2 | 2706 | CAE45875.1 | |
BX640969.1 | 3 | 2586 | CAE45984.1 | |
BX640998.1 | 3 | 2586 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | TBX1 GNB1L C22orf29 SEPT5-GP1BB SEPT5 GP1BB TXNRD2 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | GNB1L C22orf29 |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | TANGO2 TBX1 LOC284865 LINC00896 LOC440792 MIR4761 RANBP1 ZDHHC8 SEPT5-GP1BB MIR185 MIR3618 DGCR6L SEPT5 MIR1306 LINC00895 RTN4R GP1BB CCDC188 MIR6816 TRMT2A MIR1286 UFD1L CLDN5 GNB1L ARVCF COMT C22orf29 LOC101927859 DGCR8 CDC45 TXNRD2 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | TANGO2 TBX1 LOC284865 LINC00896 LOC440792 MIR4761 RANBP1 ZDHHC8 SEPT5-GP1BB MIR185 MIR3618 DGCR6L SEPT5 MIR1306 RTN4R GP1BB CCDC188 MIR6816 TRMT2A MIR1286 GNB1L ARVCF COMT C22orf29 DGCR8 TXNRD2 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | TANGO2 TBX1 LOC284865 LINC00896 LOC440792 MIR4761 RANBP1 ZDHHC8 SEPT5-GP1BB MIR185 MIR3618 DGCR6L SEPT5 MIR1306 RTN4R GP1BB CCDC188 MIR6816 TRMT2A MIR1286 GNB1L ARVCF COMT C22orf29 DGCR8 TXNRD2 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | GNB1L C22orf29 TXNRD2 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | TBX1 GNB1L C22orf29 TXNRD2 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | TBX1 GNB1L C22orf29 SEPT5-GP1BB SEPT5 GP1BB TXNRD2 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | CCDC188 TANGO2 TBX1 LOC284865 MIR6816 TRMT2A LINC00896 LOC440792 MIR1286 MIR4761 GNB1L ARVCF RANBP1 COMT C22orf29 ZDHHC8 MIR185 MIR3618 DGCR6L DGCR8 MIR1306 RTN4R TXNRD2 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | PRODH TBX1 DGCR14 GSC2 TMEM191B C22orf39 LOC100996415 USP18 MIR4761 TSSK2 LOC102725072 SEPT5-GP1BB SEPT5 DGCR5 DGCR11 LINC00895 GP1BB FAM230A LOC100996401 CLTCL1 LOC100996432 MRPL40 DGCR10 DGCR2 DGCR9 HIRA UFD1L CLDN5 GNB1L LOC642643 GGT3P SLC25A1 COMT C22orf29 PI4KAP1 DGCR6 RIMBP3 CDC45 LINC01311 TXNRD2 LOC729461 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |