Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | 1 | 1050 | NP_061747.2 |
NM_032097.2 | 1 | 1050 | NP_115268.2 | |
AF152332.1 | 1 | 919 | AAD43726.1 | |
AF152519.1 | 1 | 919 | AAD43779.1 | |
BC150172.1 | 1 | 1050 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHB13 PCDHB8 PCDHGA8 PCDHA3 PCDHB14 PCDHB7 PCDHB9 PCDHA11 PCDHGA3 LOC101926905 PCDHGA2 PCDHGB6 PCDHGB7 PCDHB19P PCDHB16 PCDHA6 PCDHB10 PCDHGA7 PCDHGB5 PCDHA13 PCDHGA5 PCDHA5 PCDHA12 PCDHAC2 PCDHB12 PCDHGB8P PCDHB1 PCDHA1 PCDHGA11 PCDHGA10 PCDHB18P PCDHGA1 PCDHGB3 PCDHB4 PCDHB11 TAF7 PCDHA2 PCDHA7 PCDHGB4 PCDHGA12 PCDHGA6 PCDHGB2 PCDHA9 PCDHB17P PCDHB5 PCDHB2 PCDHA8 PCDHA4 SLC25A2 PCDHB6 PCDHB3 PCDHA10 PCDHGB1 PCDHAC1 PCDHB15 PCDHGA4 PCDHGA9 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA7 PCDHGB5 PCDHGA5 PCDHGA8 PCDHGB4 PCDHGA3 PCDHGB1 PCDHGA6 PCDHGA2 PCDHGB2 PCDHGA10 PCDHGA1 PCDHGA4 PCDHGA9 PCDHGB6 PCDHGB3 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |