Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 8 | 2793 | NP_065948.1 |
XM_011509816.2 | 8 | 3311 | XP_011508118.1 | |
XM_011509817.2 | 7 | 2631 | XP_011508119.1 | |
XM_011509818.2 | 7 | 2023 | XP_011508120.1 | |
XM_017001918.1 | 7 | 2005 | XP_016857407.1 | |
AB040968.2 | 8 | 2442 | BAA96059.2 | |
AK055840.1 | ||||
BC000066.1 | 7 | 2021 | AAH00066.1 | |
BC028024.1 | 5 | 1658 | AAH28024.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3032 | Chr.1:155285619 - 155318185 on Build GRCh38 | Insertion | HCN3 PKLR LOC105371451 FDPS |
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | MIR555 HCN3 ASH1L CLK2 FAM189B RUSC1-AS1 POU5F1P4 PKLR RUSC1 SCAMP3 LOC105371451 FDPS |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | MIR555 ARHGEF2 RUSC1-AS1 RXFP4 SCARNA26B SCARNA4 SYT11 SNORA80E POU5F1P4 RUSC1 MSTO2P LOC100505728 MSTO1 SCAMP3 LOC105371451 KIAA0907 YY1AP1 ASH1L RIT1 DAP3 SCARNA26A GON4L FDPS HCN3 CLK2 FAM189B PKLR ASH1L-AS1 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | HCN3 PKLR |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | HCN3 CLK2 PKLR SCAMP3 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | HCN3 CLK2 PKLR SCAMP3 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | THBS3 ASH1L DPM3 KRTCAP2 RUSC1-AS1 GBAP1 GBA MIR92B FDPS HCN3 MUC1 TRIM46 SLC50A1 CLK2 FAM189B EFNA1 MTX1 PKLR RUSC1 SCAMP3 LOC105371451 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |