Hs00511316_cn

• Gene Symbol: CHAF1A
• Assay Reference Genome Location: Chr.19:4445487 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 10036
• Gene Name: chromatin assembly factor 1 subunit A
• Gene Aliases: CAF-1, CAF1, CAF1B, CAF1P150, P150
• Location: Chr.19:4402596-4448322 on Build GRCh38
• Assay Gene Location: Within Intron 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHAF1A	XM_011527605.2			XP_011525907.1

Target Gene Details

• Entrez Gene ID: 80700
• Gene Name: UBX domain protein 6
• Gene Aliases: UBXD1, UBXDC2
• Location: Chr.19:4445006-4458759 on Build GRCh38
• Assay Gene Location: Within Exon 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
UBXN6	NM_001171091.1	11	1332	NP_001164562.1
	NM_025241.2	11	1434	NP_079517.1
	XM_017027325.1	12	1865	XP_016882814.1
	AF272893.1	11	1433	AAK13257.1
	AF272894.1	11	1323	AAK13258.1
	AK090473.1	1	4118	BAC03454.1
	AL833695.1	4	1490
	BC007414.2	7	894	AAH07414.2
	BC008288.1	11	1332	AAH08288.1
	BC017113.1	4	604	AAH17113.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833720	Chr.19:4367721 - 4540556 on Build GRCh38	Loss	CHAF1A UBXN6 SH3GL1 MIR4746 PLIN5 PLIN4 HDGFRP2 LRG1
nsv833718	Chr.19:4221577 - 4480248 on Build GRCh38	Loss	UBXN6 MPND ANKRD24 CCDC94 FSD1 CHAF1A TMIGD2 SHD SH3GL1 MIR4746 STAP2 HDGFRP2 EBI3

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

DNA replication
DNA repair
DNA replication-dependent nucleosome assembly
protein complex assembly
cell cycle
chromatin assembly
biological_process

Function(s)

chromatin binding
protein binding
identical protein binding
unfolded protein binding
chromo shadow domain binding
molecular_function