Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56109 |
Gene Name: | protocadherin gamma subfamily A, 6 |
Gene Aliases: |
PCDH-GAMMA-A6 |
Location: |
Chr.5:141374084-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA6 | NM_018919.2 | NP_061742.1 | ||
AB209178.1 | BAD92415.1 | |||
AF152326.1 | AAD43720.1 | |||
BC146651.1 |
Target Gene Details
Entrez Gene ID: | 56108 |
Gene Name: | protocadherin gamma subfamily A, 7 |
Gene Aliases: |
PCDH-GAMMA-A7 |
Location: |
Chr.5:141382739-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA7 | NM_018920.3 | NP_061743.1 | ||
AB208958.1 | BAD92195.1 | |||
AF152327.1 | AAD43721.1 |
Target Gene Details
Entrez Gene ID: | 9708 |
Gene Name: | protocadherin gamma subfamily A, 8 |
Gene Aliases: |
PCDH-GAMMA-A8 |
Location: |
Chr.5:141391916-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA8 | NM_014004.2 | 1 | 2231 | NP_054723.1 |
NM_032088.1 | 1 | 2231 | NP_114477.1 | |
AB002325.1 | 1 | 3990 | ||
AF152328.1 | 1 | 1333 | AAD43722.1 | |
AF152515.1 | 1 | 1333 | AAD43775.1 | |
BC152415.1 | 1 | 3990 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | NP_061747.2 | ||
AF152332.1 | AAD43726.1 | |||
BC150172.1 |
Target Gene Details
Entrez Gene ID: | 8641 |
Gene Name: | protocadherin gamma subfamily B, 4 |
Gene Aliases: |
CDH20, FIB2, PCDH-GAMMA-B4 |
Location: |
Chr.5:141387885-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB4 | NM_003736.2 | NP_003727.1 | ||
AF152333.1 | AAD43727.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | SLC25A2 LOC101926905 PCDHA4 PCDHB18P PCDHB16 PCDHGB3 PCDHA9 PCDHB15 PCDHA6 PCDHB9 PCDHGB7 PCDHA7 PCDHGA10 PCDHB14 PCDHB2 PCDHGB1 PCDHGB4 PCDHA5 PCDHB8 PCDHGB5 PCDHB17P PCDHB1 PCDHA1 PCDHB5 PCDHA12 PCDHGA2 PCDHB13 PCDHB11 PCDHB4 TAF7 PCDHGA9 PCDHGB6 PCDHA13 PCDHGB2 PCDHAC1 PCDHA10 PCDHB12 PCDHA8 PCDHGA8 PCDHA2 PCDHGA6 PCDHGA4 PCDHB10 PCDHB3 PCDHA3 PCDHAC2 PCDHGA12 PCDHGA1 PCDHB6 PCDHGB8P PCDHGA7 PCDHB19P PCDHGA11 PCDHA11 PCDHB7 PCDHGA5 PCDHGA3 |
esv3606985 | Chr.5:141389770 - 141397963 on Build GRCh38 | Gain | PCDHGB1 PCDHGB3 PCDHGA7 PCDHGB4 PCDHGA8 PCDHGA6 PCDHGA4 PCDHGA5 PCDHGA1 PCDHGA2 PCDHGA3 PCDHGB2 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGB1 PCDHGB4 PCDHGA9 PCDHGB6 PCDHGB5 PCDHGA1 PCDHGB2 PCDHGB3 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA4 PCDHGA5 PCDHGA2 PCDHGA3 PCDHGA10 |
nsv823280 | Chr.5:141388318 - 141397872 on Build GRCh38 | Loss | PCDHGB1 PCDHGB3 PCDHGA7 PCDHGB4 PCDHGA8 PCDHGA6 PCDHGA4 PCDHGA5 PCDHGA1 PCDHGA2 PCDHGA3 PCDHGB2 |
nsv519627 | Chr.5:141392860 - 141427689 on Build GRCh38 | Loss | PCDHGB1 PCDHGB4 PCDHGA9 PCDHGB6 PCDHGB5 PCDHGA1 PCDHGB2 PCDHGB3 PCDHGB8P PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA11 PCDHGB7 PCDHGA4 PCDHGA5 PCDHGA2 PCDHGA3 PCDHGA10 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |