Assay Details
Target Gene Details
Entrez Gene ID: | 55911 |
Gene Name: | apolipoprotein B receptor |
Gene Aliases: |
APOB100R, APOB48R |
Location: |
Chr.16:28494649-28498970 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
APOBR | NM_018690.3 | 4 | 3523 | NP_061160.3 |
AF141332.1 | 5 | 3473 | AAF76255.1 | |
AF141334.1 | 5 | 3473 | AAF78765.1 | |
AK025123.1 | 3 | 1375 | ||
AK075085.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509608 | Chr.16:28449797 - 28632895 on Build GRCh38 | Insertion | CLN3 APOBR NUPR1 SULT1A1 SGF29 IL27 SULT1A2 |
esv2758640 | Chr.16:28163817 - 29139232 on Build GRCh38 | Gain+Loss | ATXN2L NUPR1 NFATC2IP MIR4517 EIF3C SH2B1 SPNS1 ATP2A1 RRN3P2 SULT1A1 LOC101928215 NPIP EIF3CL MIR6862-2 NPIPB9 NPIPB8 APOBR SGF29 IL27 CD19 NPIPB6 RABEP2 XPO6 CLN3 SBK1 LAT TUFM ATP2A1-AS1 SULT1A2 MIR6862-1 MIR4721 |
nsv1059555 | Chr.16:28373144 - 29195838 on Build GRCh38 | Gain | ATXN2L NUPR1 NFATC2IP MIR4517 EIF3C SH2B1 SPNS1 ATP2A1 RRN3P2 SULT1A1 LOC101928215 NPIP EIF3CL MIR6862-2 NPIPB9 NPIPB8 APOBR SGF29 LOC107984832 IL27 CD19 RABEP2 CLN3 LAT TUFM ATP2A1-AS1 SULT1A2 MIR6862-1 MIR4721 |
nsv833180 | Chr.16:28346157 - 28574165 on Build GRCh38 | Loss | CLN3 APOBR NUPR1 EIF3CL SGF29 IL27 MIR6862-1 NPIPB6 |
nsv9415 | Chr.16:28468881 - 28498959 on Build GRCh38 | Gain | CLN3 APOBR |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |