Hs00482955_cn

• Gene Symbol: SPTY2D1
• Assay Reference Genome Location: Chr.11:18607259 on build GRCh38
• Cytoband: 11p15.1

Target Gene Details

• Entrez Gene ID: 144108
• Gene Name: SPT2 chromatin protein domain containing 1
• Gene Aliases: Spt2
• Location: Chr.11:18606401-18634823 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPTY2D1	NM_194285.2	6	4876	NP_919261.2
	XM_011519919.2	6	4734	XP_011518221.1
	AK096694.1	2	2780
	AL834393.1	3	2926	CAD39055.1
	BC056261.1			AAH56261.1
	BX538046.1	4	3255	CAD97985.1
	BX641102.1	6	4777	CAE46047.1
	BX647798.1	6	4876
	BX648114.1	4	4455	CAH10772.1
	BX648478.1	6	4798
	CR749626.1	4	4319	CAH18420.1

Target Gene Details

• Entrez Gene ID: 100506540
• Gene Name: SPTY2D1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.11:18599804-18610255 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPTY2D1-AS1	NR_038360.1
	AK097654.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv553633	Chr.11:18290154 - 19036904 on Build GRCh38	Gain	GTF2H1 MRGPRX1 SPTY2D1-AS1 MIR3159 LDHC LDHAL6A PTPN5 IGSF22 HPS5 SPTY2D1 LDHA TMEM86A UEVLD TSG101
nsv516413	Chr.11:18606871 - 18622211 on Build GRCh38	Loss	SPTY2D1-AS1 SPTY2D1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

nucleosome assembly
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of chromatin assembly
histone exchange

Function(s)

RNA polymerase I core binding
DNA binding
histone binding