Assay Details
Target Gene Details
Entrez Gene ID: | 57410 |
Gene Name: | SCY1 like pseudokinase 1 |
Gene Aliases: |
GKLP, HT019, NKTL, NTKL, P105, SCAR21, TAPK, TEIF, TRAP |
Location: |
Chr.11:65525065-65538711 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCYL1 | NM_001048218.1 | 11 | 1587 | NP_001041683.1 |
NM_020680.3 | 11 | 1587 | NP_065731.3 | |
XM_005274118.3 | 11 | 1599 | XP_005274175.1 | |
XM_005274120.3 | 11 | 1599 | XP_005274177.1 | |
XM_005274121.3 | 11 | 1599 | XP_005274178.1 | |
XM_017018029.1 | 11 | 1599 | XP_016873518.1 | |
XM_017018030.1 | 11 | 1599 | XP_016873519.1 | |
XM_017018031.1 | 11 | 1599 | XP_016873520.1 | |
XM_017018032.1 | 11 | 1441 | XP_016873521.1 | |
XM_017018033.1 | 11 | 1591 | XP_016873522.1 | |
AB047077.1 | 11 | 1510 | BAB55454.1 | |
AB051427.1 | 11 | 1510 | BAB55458.1 | |
AB051428.1 | 11 | 1510 | BAB55459.1 | |
AF225424.1 | 5 | 651 | AAG09726.1 | |
AF297709.1 | 11 | 1549 | AAG17902.1 | |
AK302198.1 | ||||
AK314945.1 | 11 | 1543 | ||
BC009967.2 | 5 | 585 | AAH09967.2 | |
BC069233.1 | 11 | 1551 | AAH69233.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv555212 | Chr.11:65535422 - 65540385 on Build GRCh38 | Loss | SCYL1 LTBP3 |
nsv951018 | Chr.11:65525430 - 65662029 on Build GRCh38 | Deletion | EHBP1L1 LTBP3 SSSCA1 KCNK7 RELA MIR4690 MIR4489 FAM89B SCYL1 SIPA1 MAP3K11 SSSCA1-AS1 PCNX3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |