Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 684 | NP_078903.3 |
AK024778.1 | 1 | 60 | BAB14998.1 | |
AK225088.1 | 1 | 60 | ||
AK291262.1 | 3 | 652 | ||
AL832509.1 | 3 | 573 | ||
BC011679.2 | 1 | 191 | AAH11679.2 | |
BX640785.1 | 2 | 773 | CAE45875.1 | |
BX640969.1 | 3 | 653 | CAE45984.1 | |
BX640998.1 | 3 | 653 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | GNB1L GP1BB SEPT5 SEPT5-GP1BB TXNRD2 C22orf29 TBX1 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | GNB1L C22orf29 |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | MIR4761 LINC00895 LINC00896 GP1BB COMT TANGO2 TRMT2A C22orf29 ARVCF MIR1306 CDC45 LOC440792 DGCR8 SEPT5-GP1BB MIR3618 RANBP1 DGCR6L GNB1L MIR6816 UFD1L SEPT5 LOC284865 LOC101927859 RTN4R CLDN5 MIR185 ZDHHC8 MIR1286 TXNRD2 CCDC188 TBX1 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | MIR4761 LINC00896 GP1BB COMT TANGO2 TRMT2A C22orf29 ARVCF MIR1306 LOC440792 DGCR8 SEPT5-GP1BB MIR3618 RANBP1 DGCR6L GNB1L MIR6816 SEPT5 LOC284865 RTN4R MIR185 ZDHHC8 MIR1286 TXNRD2 CCDC188 TBX1 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | MIR4761 LINC00896 GP1BB COMT TANGO2 TRMT2A C22orf29 ARVCF MIR1306 LOC440792 DGCR8 SEPT5-GP1BB MIR3618 RANBP1 DGCR6L GNB1L MIR6816 SEPT5 LOC284865 RTN4R MIR185 ZDHHC8 MIR1286 TXNRD2 CCDC188 TBX1 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | GNB1L TXNRD2 C22orf29 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | GNB1L TXNRD2 C22orf29 TBX1 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | GNB1L GP1BB SEPT5 SEPT5-GP1BB TXNRD2 C22orf29 TBX1 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | RANBP1 MIR4761 LINC00896 DGCR6L GNB1L MIR6816 COMT TANGO2 LOC284865 TRMT2A C22orf29 ARVCF MIR1306 LOC440792 RTN4R DGCR8 MIR185 ZDHHC8 MIR1286 TXNRD2 MIR3618 CCDC188 TBX1 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | DGCR9 DGCR6 MIR4761 LINC00895 FAM230A GP1BB COMT DGCR5 C22orf29 USP18 TMEM191B CDC45 GGT3P LOC642643 DGCR11 DGCR10 SEPT5-GP1BB CLTCL1 LOC100996432 LOC100996415 GNB1L PRODH UFD1L SEPT5 PI4KAP1 C22orf39 DGCR2 SLC25A1 GSC2 MRPL40 HIRA LINC01311 RIMBP3 LOC102725072 TSSK2 DGCR14 CLDN5 LOC100996401 TXNRD2 LOC729461 TBX1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |