Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | 1 | 191 | NP_061745.1 |
NM_032095.1 | 1 | 191 | NP_115266.1 | |
AF152330.1 | 1 | 191 | AAD43724.1 | |
AF152517.1 | 1 | 191 | AAD43777.1 | |
BC103926.1 | 1 | 191 | AAI03927.1 | |
BC103927.1 | 1 | 191 | AAI03928.1 | |
BC103928.1 | 1 | 191 | AAI03929.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHB9 PCDHA5 PCDHB3 PCDHA12 PCDHGB1 PCDHGB3 PCDHB8 PCDHB13 PCDHGA7 PCDHGA9 PCDHGA3 PCDHGA4 PCDHGA10 PCDHGB6 PCDHB10 PCDHA4 PCDHGA8 PCDHB1 PCDHB11 PCDHGA11 PCDHB14 PCDHA13 PCDHB6 PCDHB15 PCDHA2 PCDHA3 PCDHGA2 PCDHB5 PCDHGB4 PCDHB2 PCDHGA1 PCDHGA6 PCDHGA12 PCDHGA5 LOC101926905 PCDHAC2 PCDHB16 PCDHGB5 PCDHA11 PCDHA7 PCDHA6 PCDHB7 PCDHA9 PCDHB19P PCDHA1 PCDHGB7 PCDHB18P TAF7 PCDHB17P PCDHB12 PCDHGB2 PCDHA10 PCDHB4 SLC25A2 PCDHAC1 PCDHGB8P PCDHA8 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA6 PCDHGB2 PCDHGA5 PCDHGB1 PCDHGB3 PCDHGA7 PCDHGA2 PCDHGA9 PCDHGA3 PCDHGA4 PCDHGA10 PCDHGB6 PCDHGB5 PCDHGA8 PCDHGB4 PCDHGA1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |