Assay Details
Target Gene Details
Entrez Gene ID: | 56649 |
Gene Name: | transmembrane protease, serine 4 |
Gene Aliases: |
CAPH2, MT-SP2, TMPRSS3 |
Location: |
Chr.11:118077012-118125505 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMPRSS4 | NM_001083947.1 | 1 | 122 | NP_001077416.1 |
NM_001173551.1 | 1 | 122 | NP_001167022.1 | |
NM_001173552.1 | 1 | 122 | NP_001167023.1 | |
NM_001290094.1 | 1 | 122 | NP_001277023.1 | |
NM_001290096.1 | 1 | 122 | NP_001277025.1 | |
NM_019894.3 | 1 | 122 | NP_063947.1 | |
NR_110734.1 | 1 | 122 | ||
XM_005271613.3 | 1 | 115 | XP_005271670.1 | |
XM_005271614.2 | 1 | 86 | XP_005271671.1 | |
XM_005271615.3 | 1 | 117 | XP_005271672.1 | |
XM_011542901.2 | 1 | 117 | XP_011541203.1 | |
XM_011542902.2 | 1 | 117 | XP_011541204.1 | |
XM_011542903.2 | 1 | 116 | XP_011541205.1 | |
XM_011542904.2 | 1 | 118 | XP_011541206.1 | |
AF179224.1 | 1 | 45 | AAF74526.1 | |
AF216312.1 | 1 | 38 | AAF31436.1 | |
AK172766.1 | BAD18749.1 | |||
AK290361.1 | 1 | 56 | ||
AK296855.1 | 1 | 60 | ||
AK303173.1 | 1 | 57 | ||
AK304113.1 | 1 | 96 | ||
AK304215.1 | 1 | 56 | ||
AK308434.1 | 1 | 59 | ||
AK311290.1 | 1 | 96 | ||
AY358530.1 | 1 | 40 | AAQ88894.1 | |
BC011703.2 | 1 | 38 | AAH11703.1 | |
BP220493.1 | 1 | 122 |
Target Gene Details
Entrez Gene ID: | 100526771 |
Gene Name: | TMPRSS4 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.11:118015772-118086793 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMPRSS4-AS1 | NR_038318.1 | |||
AB231754.1 | ||||
AB231755.1 | ||||
AB231756.1 | ||||
AB231757.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv468878 | Chr.11:118076983 - 118161527 on Build GRCh38 | Gain | TMPRSS4 SCN4B TMPRSS4-AS1 |
nsv1049373 | Chr.11:118066351 - 118134273 on Build GRCh38 | Loss | TMPRSS4 SCN4B TMPRSS4-AS1 |
nsv556463 | Chr.11:118061915 - 118099611 on Build GRCh38 | Loss | TMPRSS4 TMPRSS4-AS1 |
nsv1159938 | Chr.11:118075976 - 118157452 on Build GRCh38 | Duplication | TMPRSS4 SCN4B TMPRSS4-AS1 |
nsv509444 | Chr.11:118033438 - 118117536 on Build GRCh38 | Insertion | TMPRSS4 TMPRSS4-AS1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |