Hs00390082_cn

• Gene Symbol: AGBL4
• Assay Reference Genome Location: Chr.1:48761408 on build GRCh38
• Cytoband: 1p33

Target Gene Details

• Entrez Gene ID: 84871
• Gene Name: ATP/GTP binding protein like 4
• Gene Aliases: CCP6
• Location: Chr.1:48520157-50024011 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AGBL4	NM_001323573.1			NP_001310502.1
	NM_001323574.1			NP_001310503.1
	NM_001323575.1			NP_001310504.1
	NM_032785.3			NP_116174.3
	NR_136623.1
	XM_011542308.2			XP_011540610.1
	XM_017002595.1			XP_016858084.1
	XM_017002596.1			XP_016858085.1
	XM_017002597.1			XP_016858086.1
	AK027348.1			BAB55053.1
	AK094826.1
	AK294394.1
	AK294633.1
	AK296221.1
	BC126383.1

Target Gene Details

• Entrez Gene ID: 79656
• Gene Name: BEN domain containing 5
• Gene Aliases: C1orf165
• Location: Chr.1:48727523-48778603 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
BEND5	NM_001302082.1	2	427	NP_001289011.1
	NM_024603.3	2	427	NP_078879.2
	XM_011542141.2	2	2927	XP_011540443.1
	XM_011542142.2			XP_011540444.1
	XM_017002331.1	3	460	XP_016857820.1
	XM_017002332.1	3	337	XP_016857821.1
	XM_017002333.1	2	2061	XP_016857822.1
	XM_017002334.1	3	474	XP_016857823.1
	AK021650.1	2	289	BAB13864.1
	AK055449.1
	BC007932.2	2	379	AAH07932.2
	BC011804.2	2	193	AAH11804.1
	CD672851.1
	KU178776.1	2	289
	KU178777.1	2	289
	KU178778.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv829771	Chr.1:48713186 - 48895189 on Build GRCh38	Gain	AGBL4 BEND5

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

proteolysis
protein deglutamylation
C-terminal protein deglutamylation
protein side chain deglutamylation
defense response to virus
transcription, DNA-templated
negative regulation of transcription, DNA-templated

Function(s)

metallocarboxypeptidase activity
zinc ion binding
tubulin binding
DNA binding
protein binding