Hs00342752_cn

• Gene Symbol: AICDA
• Assay Reference Genome Location: Chr.12:8604278 on build GRCh38
• Cytoband: 12p13.31

Target Gene Details

• Entrez Gene ID: 57379
• Gene Name: activation-induced cytidine deaminase
• Gene Aliases: AID, ARP2, CDA2, HEL-S-284, HIGM2
• Location: Chr.12:8602166-8612970 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AICDA	NM_020661.2			NP_065712.1
	XM_011520772.2			XP_011519074.1
	XM_011520773.2			XP_011519075.1
	AB040431.1			BAB12721.1
	AF529815.1			AAM95402.1
	AF529816.1			AAM95403.1
	AF529817.1			AAM95404.1
	AF529818.1			AAM95405.1
	AF529819.1			AAM95406.1
	AF529820.1			AAM95407.1
	AF529821.1			AAM95408.1
	AF529822.1			AAM95409.1
	AF529823.1			AAM95410.1
	AF529824.1			AAM95411.1
	AF529825.1			AAM95412.1
	AF529826.1			AAM95413.1
	AF529827.1			AAM95414.1
	AY534975.1			AAS90604.1
	AY536516.1			AAS92920.1
	AY536517.1			AAS92921.1
	AY541058.1			AAS98257.1
	BC006296.2			AAH06296.1
	BT007402.1			AAP36066.1
	BX402063.2
	DQ431660.1
	EU794587.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527782	Chr.12:8604195 - 8604885 on Build GRCh38	Gain	AICDA
nsv1051530	Chr.12:8442286 - 9951690 on Build GRCh38	Gain	M6PR CLEC4D DDX12P KLRG1 PZP KLRB1 LOC101930452 PHC1 LINC00987 CLEC6A OVOS LOC105369728 KLRF1 A2ML1 AICDA LOC400002 MFAP5 LINC00612 LOC105376678 LOC100506159 A2M-AS1 CLEC2A LOC642846 CLECL1 CLEC2B KLRF2 LOC728715 RIMKLB A2M CLEC12A LOC374443 CD69 CLEC4E LOC105369649 LOC101928030 A2MP1 CLEC2D MIR1244-3
nsv557342	Chr.12:8446801 - 8621931 on Build GRCh38	Loss	CLEC4D AICDA CLEC4E CLEC6A
dgv1362n100	Chr.12:8296504 - 8639973 on Build GRCh38	Gain	CLEC4D AICDA CLEC4E LINC00937 CLEC6A

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

mRNA processing
cytidine deamination
somatic diversification of immunoglobulins
somatic hypermutation of immunoglobulin genes
B cell differentiation
isotype switching
cellular response to lipopolysaccharide
DNA demethylation
negative regulation of methylation-dependent chromatin silencing

Function(s)

cytidine deaminase activity
protein binding
zinc ion binding
ubiquitin protein ligase binding