Assay Details
Target Gene Details
Entrez Gene ID: | 57446 |
Gene Name: | NDRG family member 3 |
Gene Aliases: |
- |
Location: |
Chr.20:36651766-36746138 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NDRG3 | NM_022477.3 | 15 | 2769 | NP_071922.2 |
NM_032013.3 | 16 | 2805 | NP_114402.1 | |
NR_038370.1 | 14 | 2578 | ||
XM_006723837.3 | 17 | 2787 | XP_006723900.1 | |
XM_006723838.3 | 15 | 2889 | XP_006723901.1 | |
XM_011528925.2 | 15 | 2699 | XP_011527227.1 | |
XM_011528926.2 | 14 | 2660 | XP_011527228.1 | |
XM_011528927.2 | 16 | 2751 | XP_011527229.1 | |
XM_011528928.2 | 15 | 2606 | XP_011527230.1 | |
XM_017027978.1 | 17 | 3084 | XP_016883467.1 | |
XM_017027979.1 | 16 | 3045 | XP_016883468.1 | |
XM_017027980.1 | 14 | 2819 | XP_016883469.1 | |
AA903471.1 | 1 | 227 | ||
AB044943.1 | 16 | 2745 | BAB20067.1 | |
AF308609.1 | 15 | 2667 | AAL08807.1 | |
AK027665.1 | 15 | 2698 | BAB55277.1 | |
AK128068.1 | 1 | 3787 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3575371 | Chr.20:36629297 - 36654563 on Build GRCh38 | Gain | SLA2 NDRG3 |
nsv833967 | Chr.20:36477427 - 36658869 on Build GRCh38 | Loss | DLGAP4-AS1 TGIF2-C20orf24 DLGAP4 MYL9 C20orf24 SLA2 TGIF2 NDRG3 |
nsv1057192 | Chr.20:36514051 - 36839310 on Build GRCh38 | Loss | DLGAP4-AS1 DSN1 TGIF2-C20orf24 DLGAP4 MYL9 C20orf24 SOGA1 SLA2 TGIF2 NDRG3 |
More Information
Additional Information:
For this assay, SNP(s) [rs117049135] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |