Assay Details
Target Gene Details
Entrez Gene ID: | 823 |
Gene Name: | calpain 1 |
Gene Aliases: |
CANP, CANP1, CANPL1, SPG76, muCANP, muCL |
Location: |
Chr.11:65181215-65212006 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CAPN1 | NM_001198868.1 | 6 | 901 | NP_001185797.1 |
NM_001198869.1 | 6 | 870 | NP_001185798.1 | |
NM_005186.3 | 6 | 886 | NP_005177.2 | |
NR_040008.1 | 5 | 816 | ||
XM_006718698.1 | 6 | 801 | XP_006718761.1 | |
XM_011545292.1 | 6 | 812 | XP_011543594.1 | |
AK301538.1 | 5 | 708 | ||
AK311001.1 | 5 | 456 | ||
AK315556.1 | 6 | 815 | ||
AY550975.1 | 5 | 709 | AAT52221.1 | |
BC008751.2 | 6 | 837 | AAH08751.1 | |
BC017200.2 | 6 | 723 | AAH17200.1 | |
BC075862.1 | 6 | 804 | AAH75862.1 | |
X04366.1 | 6 | 847 | CAA27881.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509418 | Chr.11:65164531 - 65202781 on Build GRCh38 | Insertion | CAPN1 SPDYC |
nsv526181 | Chr.11:64870569 - 65489858 on Build GRCh38 | Gain | CDC42EP2 VPS51 MIR6879 SYVN1 EHD1 SPDYC POLA2 ARL2-SNX15 MIR6749 CDCA5 FRMD8 MIR6751 GPHA2 MIR194-2 DPF2 MIR194-2HG SNX15 NEAT1 PPP2R5B ATG2A CAPN1 MIR6750 ARL2 SLC25A45 MIR612 MIR192 SAC3D1 NAALADL1 LOC101927789 MRPL49 FAU TMEM262 SLC22A20 ZNHIT2 TM7SF2 MAJIN BATF2 TIGD3 ZFPL1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |