Assay Details
Target Gene Details
Entrez Gene ID: | 50614 |
Gene Name: | polypeptide N-acetylgalactosaminyltransferase 9 |
Gene Aliases: |
GALNAC-T9, GALNACT9 |
Location: |
Chr.12:132195829-132329364 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GALNT9 | NM_001122636.1 | 11 | 2199 | NP_001116108.1 |
NM_021808.3 | 7 | 1263 | NP_068580.2 | |
XM_017019371.1 | 10 | 1931 | XP_016874860.1 | |
XM_017019372.1 | 10 | 1891 | XP_016874861.1 | |
XM_017019373.1 | 11 | 2248 | XP_016874862.1 | |
XM_017019374.1 | 10 | 1868 | XP_016874863.1 | |
AF458594.1 | 7 | 1260 | AAM49722.1 | |
AK054820.1 | 8 | 1400 | ||
AK055773.1 | 10 | 1856 | ||
BM672467.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv3019n54 | Chr.12:132181784 - 132203592 on Build GRCh38 | Loss | GALNT9 |
esv3892285 | Chr.12:132154873 - 132201281 on Build GRCh38 | Gain | GALNT9 |
nsv560966 | Chr.12:132194518 - 132483313 on Build GRCh38 | Gain | MUC8 LOC105370092 GALNT9 LOC100130238 LOC101928416 |
esv3631288 | Chr.12:132190709 - 132205907 on Build GRCh38 | Gain | GALNT9 |
esv3580551 | Chr.12:132196503 - 132206310 on Build GRCh38 | Loss | GALNT9 |
nsv952512 | Chr.12:132192256 - 132711214 on Build GRCh38 | Deletion | MIR6763 MUC8 FBRSL1 PGAM5 LRCOL1 LOC100130238 LOC100996573 POLE LOC105370092 GALNT9 P2RX2 PXMP2 LOC101928416 |
nsv1041402 | Chr.12:132076412 - 132441297 on Build GRCh38 | Gain | LOC105370092 NOC4L EP400 GALNT9 EP400NL DDX51 LOC100130238 LOC101928416 |
nsv528119 | Chr.12:132174775 - 132218324 on Build GRCh38 | Loss | GALNT9 |
nsv826563 | Chr.12:132125383 - 132622340 on Build GRCh38 | Gain | MIR6763 MUC8 FBRSL1 NOC4L LRCOL1 LOC100130238 LOC100996573 LOC105370092 GALNT9 P2RX2 EP400NL DDX51 LOC101928416 |
dgv103n21 | Chr.12:132117051 - 132442096 on Build GRCh38 | Loss | LOC105370092 NOC4L GALNT9 EP400NL DDX51 LOC100130238 LOC101928416 |
nsv428285 | Chr.12:132065104 - 132208513 on Build GRCh38 | Gain | NOC4L EP400 GALNT9 EP400NL DDX51 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |