Assay Details
Target Gene Details
Entrez Gene ID: | 56649 |
Gene Name: | transmembrane protease, serine 4 |
Gene Aliases: |
CAPH2, MT-SP2, TMPRSS3 |
Location: |
Chr.11:118077012-118125505 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 3 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMPRSS4 | NM_001083947.1 | NP_001077416.1 | ||
NM_001173551.1 | NP_001167022.1 | |||
NM_001173552.1 | NP_001167023.1 | |||
NM_001290094.1 | NP_001277023.1 | |||
NM_001290096.1 | NP_001277025.1 | |||
NM_019894.3 | NP_063947.1 | |||
NR_110734.1 | ||||
XM_005271613.3 | XP_005271670.1 | |||
XM_005271614.2 | XP_005271671.1 | |||
XM_005271615.3 | XP_005271672.1 | |||
XM_011542901.2 | XP_011541203.1 | |||
XM_011542902.2 | XP_011541204.1 | |||
XM_011542903.2 | XP_011541205.1 | |||
XM_011542904.2 | XP_011541206.1 | |||
AF179224.1 | AAF74526.1 | |||
AF216312.1 | AAF31436.1 | |||
AK172766.1 | BAD18749.1 | |||
AK290361.1 | ||||
AK296855.1 | ||||
AK303173.1 | ||||
AK304113.1 | ||||
AK304215.1 | ||||
AK308434.1 | ||||
AY358530.1 | AAQ88894.1 | |||
BC011703.2 | AAH11703.1 | |||
BP220493.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv468878 | Chr.11:118076983 - 118161527 on Build GRCh38 | Gain |
![]() ![]() ![]() |
esv3892103 | Chr.11:118081382 - 118161527 on Build GRCh38 | Gain |
![]() ![]() ![]() |
nsv1049373 | Chr.11:118066351 - 118134273 on Build GRCh38 | Loss |
![]() ![]() ![]() |
nsv556463 | Chr.11:118061915 - 118099611 on Build GRCh38 | Loss |
![]() ![]() |
nsv1159938 | Chr.11:118075976 - 118157452 on Build GRCh38 | Duplication |
![]() ![]() ![]() |
nsv509444 | Chr.11:118033438 - 118117536 on Build GRCh38 | Insertion |
![]() ![]() |
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs116316020] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
![]() ![]() ![]() |
Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)