Assay Details
Target Gene Details
Entrez Gene ID: | 79948 |
Gene Name: | phospholipid phosphatase related 3 |
Gene Aliases: |
LPPR3, LPR3, PRG-2, PRG2 |
Location: |
Chr.19:812488-824244 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 5 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLPPR3 | NM_001270366.1 | NP_001257295.1 | ||
NM_024888.2 | NP_079164.1 | |||
XM_011528317.2 | XP_011526619.1 | |||
AF357888.1 | AAO85401.1 | |||
AF541282.1 | AAP57771.1 | |||
AL136596.1 | CAB66531.1 | |||
AY304517.1 | AAP72154.1 | |||
AY436785.1 | AAR10818.1 | |||
BC012339.1 | AAH12339.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv134n111 | Chr.19:607984 - 967584 on Build GRCh38 | Deletion | PLPPR3 MED16 POLRMT ELANE ARID3A KISS1R RNU6-9 MIR3187 R3HDM4 AZU1 FGF22 MISP LOC101928450 HCN2 FSTL3 PRTN3 PALM CFD RNF126 PRSS57 MIR4745 PTBP1 |
nsv578172 | Chr.19:811414 - 841398 on Build GRCh38 | Loss | PLPPR3 AZU1 PRTN3 MIR3187 PTBP1 |
nsv578167 | Chr.19:797079 - 850574 on Build GRCh38 | Loss | PLPPR3 AZU1 PRTN3 MIR4745 MIR3187 PTBP1 |
nsv828354 | Chr.19:796933 - 815173 on Build GRCh38 | Gain | PLPPR3 MIR4745 MIR3187 PTBP1 |
nsv953938 | Chr.19:355801 - 1104501 on Build GRCh38 | Deletion | PLPPR3 CDC34 POLRMT ELANE ARID3A WDR18 RNU6-9 GPX4 ARHGAP45 MADCAM1 RNU6-2 AZU1 MISP HCN2 ODF3L2 FSTL3 PALM LOC105372235 RNF126 MIR4745 THEG SHC2 TPGS1 MED16 ABCA7 TMEM259 POLR2E KISS1R MIR3187 C2CD4C CNN2 R3HDM4 GZMM FGF22 LOC101928450 PRTN3 CFD GRIN3B PRSS57 PTBP1 BSG |
esv2717790 | Chr.19:815136 - 815694 on Build GRCh38 | Deletion | PLPPR3 |
nsv470101 | Chr.19:401714 - 1008505 on Build GRCh38 | Loss | PLPPR3 CDC34 POLRMT ELANE ARID3A WDR18 RNU6-9 MADCAM1 AZU1 MISP HCN2 ODF3L2 FSTL3 PALM LOC105372235 RNF126 MIR4745 SHC2 TPGS1 MED16 KISS1R MIR3187 C2CD4C R3HDM4 GZMM FGF22 LOC101928450 PRTN3 CFD GRIN3B PRSS57 PTBP1 BSG |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |