Assay Details
Target Gene Details
Entrez Gene ID: | 6472 |
Gene Name: | serine hydroxymethyltransferase 2 |
Gene Aliases: |
GLYA, HEL-S-51e, SHMT |
Location: |
Chr.12:57229573-57234935 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 6 - Intron 6 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | MIR616 INHBE PIP4K2C OS9 PRIM1 LRP1-AS PTGES3 SDR9C7 NXPH4 STAT6 MIR1228 SLC39A5 ARHGEF25 NACA NDUFA4L2 RNF41 TIMELESS STAT2 STAC3 COQ10A IL23A SNORD59A KIF5A ARHGAP9 MIR6758 ANKRD52 SHMT2 LOC101927583 CNPY2 SNORD59B BAZ2A RDH16 ZBTB39 INHBC GLS2 NABP2 SPRYD4 HBCBP DCTN2 SNORA105C DTX3 R3HDM2 NAB2 DDIT3 CS TAC3 B4GALNT1 MBD6 MYO1A LRP1 APOF HSD17B6 ATP5B SLC26A10 RBMS2 NEMP1 MIP PAN2 GLI1 MARS GPR182 |
nsv519293 | Chr.12:57189889 - 57243810 on Build GRCh38 | Loss | STAC3 NXPH4 MIR1228 NDUFA4L2 SHMT2 LRP1 |
nsv952189 | Chr.12:57127118 - 57245617 on Build GRCh38 | Deletion | STAC3 NXPH4 MIR1228 NDUFA4L2 SHMT2 LRP1 LRP1-AS |
dgv96n21 | Chr.12:57139199 - 57243810 on Build GRCh38 | Loss | STAC3 NXPH4 MIR1228 NDUFA4L2 SHMT2 LRP1 LRP1-AS |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |