Assay Details
Target Gene Details
Entrez Gene ID: | 79042 |
Gene Name: | tRNA splicing endonuclease subunit 34 |
Gene Aliases: |
LENG5, PCH2C, SEN34, SEN34L |
Location: |
Chr.19:54189517-54194536 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 7 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TSEN34 | NM_001077446.3 | NP_001070914.1 | ||
NM_001282332.1 | NP_001269261.1 | |||
NM_001282333.1 | NP_001269262.1 | |||
NM_024075.4 | NP_076980.2 | |||
XM_005278290.4 | XP_005278347.1 | |||
XM_011527294.2 | XP_011525596.1 | |||
XM_011527295.1 | XP_011525597.1 | |||
AF211970.1 | ||||
AK025929.1 | BAB15284.1 | |||
AK054944.1 | ||||
AK225385.1 | ||||
AK226013.1 | ||||
AK300054.1 | ||||
BC004530.2 | AAH04530.1 | |||
BC020805.1 | AAH20805.1 | |||
BM977824.1 | ||||
DR763016.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1066425 | Chr.19:54182441 - 54237431 on Build GRCh38 | Gain | MBOAT7 LILRB3 RPS9 LILRA6 TSEN34 |
nsv9751 | Chr.19:54158885 - 54193528 on Build GRCh38 | Gain | MBOAT7 TMC4 TSEN34 LENG1 |
nsv2546 | Chr.19:54182614 - 54270671 on Build GRCh38 | Deletion | MBOAT7 LILRB3 LILRB5 RPS9 LILRA6 TSEN34 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | MBOAT7 PRPF31 OSCAR NDUFA3 TMC4 TSEN34 TFPT LENG1 CNOT3 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MBOAT7 DPRX MIR520E MIR371B MIR517C MIR371A LILRB5 RPS9 MIR519E TPM3P9 MIR498 MIR518E MIR512-2 MIR520F MIR1323 LOC284379 TSEN34 ZNF761 MIR1283-1 MIR520B MIR1283-2 MIR519C MIR518F MIR518C MIR523 ZNF813 MIR517A MIR512-1 CNOT3 MIR515-2 LILRA5 NLRP12 VN1R4 MIR522 MYADM VN1R2 ZNF665 LOC105372457 MIR527 MIR519A1 MIR518A1 MIR516B2 PRKCG BIRC8 MIR518B LILRA6 MIR519B LILRB2 MIR935 ZNF818P FAM90A27P MIR521-2 PRPF31 MIR519A2 MIR515-1 MIR520G MIR521-1 MIR372 TMC4 MIR526A2 MIR520C MIR516B1 MIR519D ZNF765 MIR518A2 MIR526A1 NDUFA3 CACNG8 ZNF845 VSTM1 MIR525 LILRB3 ZNF331 ZNF525 OSCAR MIR373 TARM1 CACNG7 MIR517B MIR516A1 MIR526B MIR4752 ZNF677 MIR518D MIR516A2 CACNG6 MIR524 MIR520D MIR520H TFPT MIR520A LENG1 |
nsv510774 | Chr.19:54158011 - 54269511 on Build GRCh38 | Deletion | MBOAT7 LILRB3 LILRB5 RPS9 LILRA6 TMC4 TSEN34 LENG1 |
esv2758771 | Chr.19:54163847 - 54954956 on Build GRCh38 | Gain+Loss | NLRP7 MBOAT7 LILRB5 RPS9 TMC4 TSEN34 KIR3DX1 LILRB4 KIR3DL3 KIR2DL3 LILRA2 KIR3DL1 LENG9 LILRP2 LENG8 LILRA1 LENG8-AS1 LOC101928804 NCR1 LAIR1 LILRA5 LILRB3 KIR3DL2 MIR8061 LAIR2 KIR2DL1 MIR4752 LILRB1 LOC102724300 LILRA4 TTYH1 CDC42EP5 KIR2DS4 LILRA6 LILRB2 KIR2DL4 FCAR |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |