Assay Details
Target Gene Details
Entrez Gene ID: | 51738 |
Gene Name: | ghrelin/obestatin prepropeptide |
Gene Aliases: |
MTLRP |
Location: |
Chr.3:10285750-10292947 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GHRL | NM_001134941.2 | 3 | 921 | NP_001128413.1 |
NM_001134944.1 | NP_001128416.1 | |||
NM_001134945.1 | NP_001128417.1 | |||
NM_001134946.1 | NP_001128418.1 | |||
NM_001302821.1 | 4 | 672 | NP_001289750.1 | |
NM_001302822.1 | 3 | 460 | NP_001289751.1 | |
NM_001302823.1 | 3 | 460 | NP_001289752.1 | |
NM_001302824.1 | 3 | 382 | NP_001289753.1 | |
NM_001302825.1 | 2 | 185 | NP_001289754.1 | |
NM_016362.4 | 3 | 921 | NP_057446.1 | |
NR_126505.1 | ||||
XM_017006612.1 | 2 | 1456 | XP_016862101.1 | |
XM_017006613.1 | 2 | 1465 | XP_016862102.1 | |
AB029434.1 | 1 | 83 | BAA89371.1 | |
AB035700.1 | 1 | 72 | BAB19045.1 | |
AJ252278.1 | 1 | 107 | CAB65733.1 | |
AY184207.1 | 1 | 83 | AAO27351.1 | |
AY359053.1 | 2 | 225 | AAQ89412.1 | |
BC025791.1 | 1 | 89 | AAH25791.1 | |
BM854032.1 | 2 | 99 | ||
EF549557.1 | ||||
EF549566.1 | 2 | 176 | ||
EF549567.1 | 2 | 225 | ||
EF549569.1 | 2 | 637 | ||
EF549571.1 | 3 | 430 | ||
EF549572.1 | 3 | 352 | ||
EF549573.1 | 2 | 155 | ||
EF549574.1 | ||||
EF549575.1 | ||||
EU072083.1 | 3 | 891 | ||
EU072084.1 | 3 | 891 | ||
EU072085.1 | 3 | 430 | ||
EU072086.1 | ||||
EU072087.1 | 4 | 642 | ||
GU942497.1 | 1 | 50 | ||
JN243773.1 | ||||
KF921297.1 |
Target Gene Details
Entrez Gene ID: | 100126793 |
Gene Name: | ghrelin opposite strand/antisense RNA |
Gene Aliases: |
GHRL-AS1, GHRLAS, NCRNA00068 |
Location: |
Chr.3:10280952-10293449 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GHRLOS | NR_004431.3 | |||
NR_024144.2 | ||||
NR_024145.2 | ||||
NR_073566.1 | ||||
NR_073567.1 | ||||
NR_073568.1 | ||||
EF549568.1 | ||||
EF549570.1 | ||||
EU072081.1 | ||||
EU072082.1 | ||||
EU789531.1 | ||||
EU789534.1 | ||||
EU789535.1 | ||||
EU789536.1 | ||||
EU789537.1 | ||||
EU789538.1 | ||||
EU789539.1 | ||||
EU789540.1 | ||||
EU789541.1 | ||||
EU789542.1 | ||||
EU789543.1 | ||||
EU789544.1 | ||||
EU789545.1 | ||||
EU789546.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv436362 | Chr.3:10048344 - 11860564 on Build GRCh38 | Deletion | VHL GHRL SEC13 LOC101927467 LINC00852 MIR378B ATP2B2-IT2 GHRLOS MIR885 TATDN2 VGLL4 SLC6A1-AS1 TAMM41 LINC00606 FANCD2OS IRAK2 HRH1 FANCD2 BRK1 ATP2B2 SLC6A1 ATG7 SLC6A11 |
nsv508903 | Chr.3:10275353 - 10401894 on Build GRCh38 | Insertion | GHRL SEC13 LINC00852 MIR378B ATP2B2 GHRLOS MIR885 TATDN2 |
nsv589650 | Chr.3:10260488 - 10294102 on Build GRCh38 | Loss | GHRL LINC00852 GHRLOS TATDN2 |
dgv762e201 | Chr.3:10008967 - 11913136 on Build GRCh38 | Deletion | VHL LINC00852 LOC401052 GHRLOS CIDECP TATDN2 SLC6A1-AS1 TAMM41 LINC00606 FANCD2OS IRAK2 FANCD2 FANCD2P2 ATP2B2 SLC6A1 ATG7 SLC6A11 GHRL SEC13 LOC101927467 MIR378B ATP2B2-IT2 MIR885 EMC3 VGLL4 HRH1 BRK1 |
nsv1121603 | Chr.3:10071433 - 11889279 on Build GRCh38 | Deletion | VHL GHRL SEC13 LOC101927467 LINC00852 MIR378B ATP2B2-IT2 GHRLOS MIR885 TATDN2 VGLL4 SLC6A1-AS1 TAMM41 LINC00606 FANCD2OS IRAK2 HRH1 FANCD2 FANCD2P2 BRK1 ATP2B2 SLC6A1 ATG7 SLC6A11 |
nsv436869 | Chr.3:10064456 - 11877985 on Build GRCh38 | Insertion | VHL GHRL SEC13 LOC101927467 LINC00852 MIR378B ATP2B2-IT2 GHRLOS MIR885 TATDN2 VGLL4 SLC6A1-AS1 TAMM41 LINC00606 FANCD2OS IRAK2 HRH1 FANCD2 FANCD2P2 BRK1 ATP2B2 SLC6A1 ATG7 SLC6A11 |
nsv1073204 | Chr.3:9996548 - 11875005 on Build GRCh38 | Deletion | VHL LINC00852 LOC401052 GHRLOS CIDECP TATDN2 SLC6A1-AS1 TAMM41 LINC00606 FANCD2OS IRAK2 FANCD2 FANCD2P2 ATP2B2 SLC6A1 ATG7 SLC6A11 GHRL SEC13 EMC3-AS1 LOC101927467 MIR378B ATP2B2-IT2 MIR885 EMC3 VGLL4 HRH1 BRK1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |