Assay Details
Target Gene Details
Entrez Gene ID: | 56938 |
Gene Name: | aryl hydrocarbon receptor nuclear translocator like 2 |
Gene Aliases: |
BMAL2, CLIF, MOP9, PASD9, bHLHe6 |
Location: |
Chr.12:27332854-27425813 on Build GRCh38 |
Assay Gene Location: | Within Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ARNTL2 | NM_001248002.1 | 16 | 1994 | NP_001234931.1 |
NM_001248003.1 | 15 | 1925 | NP_001234932.1 | |
NM_001248004.1 | 15 | 1892 | NP_001234933.1 | |
NM_001248005.1 | 14 | 1816 | NP_001234934.1 | |
NM_020183.4 | 17 | 2036 | NP_064568.3 | |
XM_006719112.3 | 16 | 1995 | XP_006719175.1 | |
XM_006719114.3 | 16 | 1726 | XP_006719177.1 | |
XM_011520766.2 | 17 | 2037 | XP_011519068.1 | |
XM_011520768.2 | 16 | 1945 | XP_011519070.1 | |
XM_011520769.2 | 16 | 1935 | XP_011519071.1 | |
XM_011520770.2 | 17 | 1855 | XP_011519072.1 | |
XM_011520771.2 | 17 | 1821 | XP_011519073.1 | |
XM_017019666.1 | 14 | 1766 | XP_016875155.1 | |
XM_017019667.1 | 17 | 2053 | XP_016875156.1 | |
XM_017019668.1 | 17 | 1850 | XP_016875157.1 | |
XM_017019669.1 | 16 | 1697 | XP_016875158.1 | |
AB039921.1 | 14 | 1568 | BAB01485.1 | |
AF231338.1 | 15 | 1721 | AAF71306.1 | |
AF231339.1 | 14 | 1682 | AAF71307.1 | |
AF246960.1 | 17 | 1835 | AAL50339.1 | |
AF246961.1 | 16 | 1793 | AAL50340.1 | |
AF246962.1 | 15 | 1724 | AAL50341.1 | |
AF246963.1 | 15 | 1691 | AAL50342.1 | |
AK296706.1 | 14 | 1750 | ||
BC000172.3 | 14 | 1643 | AAH00172.3 | |
BC125061.1 | 15 | 1686 | ||
BC125062.1 | 15 | 1724 |
Target Gene Details
Entrez Gene ID: | 101928646 |
Gene Name: | ARNTL2 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.12:27389789-27446634 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ARNTL2-AS1 | NR_109975.1 | |||
BU568793.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1406n100 | Chr.12:27128236 - 27640822 on Build GRCh38 | Gain | STK38L PPFIBP1 ARNTL2 ARNTL2-AS1 SMCO2 |
dgv2417n54 | Chr.12:27068022 - 27638988 on Build GRCh38 | Gain | STK38L PPFIBP1 ARNTL2 ARNTL2-AS1 SMCO2 C12orf71 |
nsv650 | Chr.12:27410480 - 27444459 on Build GRCh38 | Insertion | ARNTL2 ARNTL2-AS1 |
nsv436825 | Chr.12:27135971 - 27642579 on Build GRCh38 | Insertion | STK38L PPFIBP1 ARNTL2 ARNTL2-AS1 SMCO2 |
esv2745664 | Chr.12:27017516 - 27820117 on Build GRCh38 | Deletion | STK38L PPFIBP1 ARNTL2 MANSC4 MRPS35 ARNTL2-AS1 SMCO2 C12orf71 REP15 KLHL42 MED21 |
nsv832357 | Chr.12:27399918 - 27439033 on Build GRCh38 | Gain | ARNTL2 ARNTL2-AS1 |
nsv521872 | Chr.12:27114021 - 27635541 on Build GRCh38 | Gain | STK38L PPFIBP1 ARNTL2 ARNTL2-AS1 SMCO2 |
dgv271e199 | Chr.12:27089700 - 27631451 on Build GRCh38 | Deletion | STK38L PPFIBP1 ARNTL2 ARNTL2-AS1 SMCO2 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |