Hs00141610_cn

• Gene Symbol: YBX1
• Assay Reference Genome Location: Chr.1:42682421 on build GRCh38
• Cytoband: 1p34.2

Target Gene Details

• Entrez Gene ID: 4904
• Gene Name: Y-box binding protein 1
• Gene Aliases: BP-8, CBF-A, CSDA2, CSDB, DBPB, EFI-A, MDR-NF1, NSEP-1, NSEP1, YB-1, YB1
• Location: Chr.1:42682235-42703803 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YBX1	NM_004559.4	1	187	NP_004550.2
	AK309996.1
	AK311708.1
	BC000064.2			AAH00064.1
	BC002411.2			AAH02411.1
	BC038384.1			AAH38384.1
	BC065571.1			AAH65571.1
	BC070084.1			AAH70084.1
	BC071708.1			AAH71708.1
	BC072014.1			AAH72014.1
	BC090038.1			AAH90038.1
	BC098435.1			AAH98435.1
	BC106045.1			AAI06046.1
	CN353145.1
	J03827.1			AAA61308.1
	M24070.1			AAA35750.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3577249	Chr.1:42576524 - 42885152 on Build GRCh38	Gain	CCDC30 CLDN19 SVBP ZNF691 P3H1 LOC100129924 LOC105378683 LOC339539 ERMAP YBX1 C1orf50 PPIH
nsv829682	Chr.1:42589429 - 42773568 on Build GRCh38	Loss	CCDC30 CLDN19 P3H1 YBX1 C1orf50 PPIH

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter
positive regulation of cell division
CRD-mediated mRNA stabilization
protein localization to cytoplasmic stress granule

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
double-stranded DNA binding
single-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
RNA binding
protein binding
poly(A) RNA binding
GTPase binding