Assay Details
Target Gene Details
Entrez Gene ID: | 2651 |
Gene Name: | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) |
Gene Aliases: |
CCAT, CTRCT13, GCNT2C, GCNT5, IGNT, II, NACGT1, NAGCT1, ULG3, bA360O19.2, bA421M1.1 |
Location: |
Chr.6:10521283-10629368 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GCNT2 | NM_001491.2 | NP_001482.1 | ||
NM_145649.4 | NP_663624.1 | |||
NM_145655.3 | 1 | 499 | NP_663630.2 | |
XM_005248999.2 | XP_005249056.1 | |||
XM_006715052.3 | XP_006715115.1 | |||
XM_011514466.2 | 1 | 943 | XP_011512768.1 | |
AB078432.1 | BAC66781.1 | |||
AB078433.1 | 1 | 269 | BAC66782.1 | |
AF401652.1 | AAL50561.1 | |||
AF401653.1 | AAL50562.1 | |||
AF458024.1 | AAM73864.1 | |||
AF458025.1 | AAM73865.1 | |||
AF458026.1 | 1 | 269 | AAM73866.1 | |
AF458027.1 | 1 | 269 | AAM73867.1 | |
AF458028.1 | 1 | 269 | AAM74524.1 | |
AF458029.1 | 1 | 269 | AAM73869.1 | |
AF458030.1 | 1 | 269 | AAM73870.1 | |
AK090483.1 | BAC03464.1 | |||
AK098105.1 | BAC05234.1 | |||
AK291195.1 | ||||
AK291767.1 | ||||
AK307329.1 | ||||
AK307337.1 | ||||
AK307373.1 | ||||
AK313426.1 | 1 | 514 | ||
AK313903.1 | ||||
AL832714.1 | ||||
AL832719.1 | 1 | 500 | ||
AY435145.1 | AAR95646.1 | |||
AY435146.1 | AAR95647.1 | |||
AY435147.1 | 1 | 269 | AAR95648.1 | |
BC074801.2 | AAH74801.1 | |||
BC074802.2 | AAH74802.1 | |||
BC130524.1 | 1 | 441 | ||
BX503586.1 | 1 | 500 | ||
BX647576.1 | 1 | 498 | CAI46081.1 | |
BX647668.1 | 1 | 500 | ||
L19659.1 | AAA81777.1 | |||
Z19550.1 | CAA79610.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv600988 | Chr.6:10501021 - 10614845 on Build GRCh38 | Loss | GCNT2 |
nsv966670 | Chr.6:10447438 - 10871656 on Build GRCh38 | Duplication | LOC101928106 MIR5689HG C6orf52 TMEM14B MAK TMEM14C GCNT2 PAK1IP1 |
nsv462631 | Chr.6:10449025 - 10839526 on Build GRCh38 | Gain | LOC101928106 MIR5689HG C6orf52 TMEM14B MAK TMEM14C GCNT2 PAK1IP1 |
nsv470800 | Chr.6:10538711 - 10863092 on Build GRCh38 | Gain | C6orf52 TMEM14B MAK TMEM14C GCNT2 PAK1IP1 |
esv2759406 | Chr.6:10443564 - 10642899 on Build GRCh38 | Loss | LOC101928106 MIR5689HG GCNT2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |