Assay Details
Target Gene Details
Entrez Gene ID: | 64324 |
Gene Name: | nuclear receptor binding SET domain protein 1 |
Gene Aliases: |
ARA267, KMT3B, SOTOS, SOTOS1, STO |
Location: |
Chr.5:177133079-177300213 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NSD1 | NM_022455.4 | NP_071900.2 | ||
NM_172349.2 | NP_758859.1 | |||
AF322907.1 | AAK92049.1 | |||
AF380302.1 | AAL27991.1 | |||
AF395588.1 | AAL40694.1 | |||
AK126591.1 | ||||
AY049721.1 | AAL06645.1 | |||
BC021961.2 | AAH21961.1 | |||
CN333750.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv1011107 | Chr.5:177130035 - 177141113 on Build GRCh38 | Deletion | NSD1 |
nsv823351 | Chr.5:177079996 - 177144595 on Build GRCh38 | Gain | NSD1 ZNF346 FGFR4 |
nsv521574 | Chr.5:177090796 - 177174030 on Build GRCh38 | Loss | NSD1 FGFR4 |
dgv363n21 | Chr.5:176931607 - 177242486 on Build GRCh38 | Gain | NSD1 ZNF346 FGFR4 UIMC1 |
nsv509101 | Chr.5:177044099 - 177135363 on Build GRCh38 | Insertion | NSD1 ZNF346 FGFR4 |
More Information
Additional Information:
For this assay, SNP(s) [rs199639292] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |