Assay Details
Target Gene Details
Entrez Gene ID: | 100287722 |
Gene Name: | AP4B1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.1:113812612-113901237 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AP4B1-AS1 | NR_125965.1 | |||
DB028504.1 | ||||
DB074478.1 |
Target Gene Details
Entrez Gene ID: | 26191 |
Gene Name: | protein tyrosine phosphatase, non-receptor type 22 |
Gene Aliases: |
LYP, LYP1, LYP2, PEP, PTPN8 |
Location: |
Chr.1:113813811-113871761 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 15 - Exon 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTPN22 | NM_001193431.2 | NP_001180360.1 | ||
NM_001308297.1 | NP_001295226.1 | |||
NM_012411.5 | NP_036543.4 | |||
NM_015967.6 | NP_057051.3 | |||
XM_011541221.1 | XP_011539523.1 | |||
XM_011541222.1 | XP_011539524.1 | |||
XM_011541223.2 | XP_011539525.1 | |||
XM_011541225.2 | XP_011539527.1 | |||
XM_017001004.1 | XP_016856493.1 | |||
XM_017001005.1 | XP_016856494.1 | |||
AF001846.1 | AAD00904.1 | |||
AF077031.1 | AAD27764.1 | |||
AF150732.1 | AAF67472.1 | |||
AK303124.1 | ||||
AK310570.1 | ||||
AK310698.1 | ||||
BC017785.1 | AAH17785.1 | |||
BC071670.1 | AAH71670.1 | |||
GU479452.1 | ||||
JN084012.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3587240 | Chr.1:113533246 - 114158910 on Build GRCh38 | Loss | BCL2L15 MAGI3 PTPN22 AP4B1-AS1 RSBN1 PHTF1 SYT6 AP4B1 HIPK1-AS1 HIPK1 DCLRE1B OLFML3 |
esv3587239 | Chr.1:113510852 - 113866662 on Build GRCh38 | Loss | MAGI3 PTPN22 AP4B1-AS1 RSBN1 PHTF1 |
nsv831093 | Chr.1:113711545 - 113835613 on Build GRCh38 | Loss | PTPN22 AP4B1-AS1 RSBN1 PHTF1 |
esv23869 | Chr.1:113320330 - 114358495 on Build GRCh38 | Loss | BCL2L15 MAGI3 PTPN22 AP4B1-AS1 RSBN1 PHTF1 SYT6 AP4B1 HIPK1-AS1 HIPK1 DCLRE1B OLFML3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |