Assay Details
Target Gene Details
Entrez Gene ID: | 10555 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
Gene Aliases: |
1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta |
Location: |
Chr.9:136673143-136687459 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT2 | NM_001012727.1 | NP_001012745.1 | ||
NM_006412.3 | NP_006403.2 | |||
AF000237.1 | AAC51649.1 | |||
AF011374.1 | AAB64299.1 | |||
BC000026.2 | AAH00026.1 | |||
BC004529.2 | AAH04529.1 | |||
BC007269.1 | AAH07269.1 | |||
BC019292.1 | AAH19292.1 | |||
U56418.2 | AAB58776.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv32979 | Chr.9:136666564 - 136674090 on Build GRCh38 | Gain |
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dgv13005n54 | Chr.9:136605258 - 136696482 on Build GRCh38 | Loss |
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nsv509334 | Chr.9:136514168 - 136724663 on Build GRCh38 | Insertion |
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nsv951203 | Chr.9:136562849 - 136770848 on Build GRCh38 | Deletion |
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esv3545642 | Chr.9:136672575 - 136673284 on Build GRCh38 | Deletion |
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nsv469918 | Chr.9:136359865 - 137173890 on Build GRCh38 | Loss |
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esv2759720 | Chr.9:136356377 - 136932033 on Build GRCh38 | Loss |
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nsv8579 | Chr.9:136505432 - 136760256 on Build GRCh38 | Gain |
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dgv955n27 | Chr.9:136583078 - 136676165 on Build GRCh38 | Loss |
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nsv1053781 | Chr.9:136590694 - 136722927 on Build GRCh38 | Gain |
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dgv957n27 | Chr.9:136619086 - 136725859 on Build GRCh38 | Loss |
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esv2422220 | Chr.9:136584135 - 137350098 on Build GRCh38 | Deletion |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs138670030] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)