Assay Details
Target Gene Details
Entrez Gene ID: | 10865 |
Gene Name: | AT-rich interaction domain 5A |
Gene Aliases: |
MRF-1, MRF1, RP11-363D14 |
Location: |
Chr.2:96536719-96552638 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ARID5A | NM_001319085.1 | NP_001306014.1 | ||
NM_001319087.1 | NP_001306016.1 | |||
NM_001319092.1 | NP_001306021.1 | |||
NM_001319093.1 | NP_001306022.1 | |||
NM_001319094.1 | NP_001306023.1 | |||
NM_001319096.1 | NP_001306025.1 | |||
NM_212481.2 | NP_997646.1 | |||
XM_017003183.1 | XP_016858672.1 | |||
XM_017003184.1 | XP_016858673.1 | |||
XM_017003185.1 | XP_016858674.1 | |||
AK300173.1 | ||||
AK304566.1 | ||||
AK307768.1 | ||||
BM556343.1 | ||||
BX396215.2 | ||||
BX648918.1 | ||||
CR981009.1 | ||||
HY002073.1 | ||||
HY076710.1 | ||||
M62324.1 | AAA36325.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2720413 | Chr.2:96472591 - 96793459 on Build GRCh38 | Deletion | FER1L5 NEURL3 LMAN2L KANSL3 CNNM4 ARID5A LOC105373496 |
dgv607e201 | Chr.2:95855884 - 97561622 on Build GRCh38 | Deletion | LOC107984110 GPAT2 FAM178B FAHD2CP ANKRD23 SEMA4C ITPRIPL1 LOC100506123 ANKRD39 ANKRD36B SNRNP200 ADRA2B LOC105373495 DUSP2 ASTL LOC100506076 STARD7 LOC653924 NEURL3 FAHD2B LMAN2L KANSL3 ARID5A LOC105373496 FER1L5 CIAO1 STARD7-AS1 TMEM127 CNNM3 NCAPH CNNM4 MIR3127 ANKRD36 LOC101927053 ANKRD36C |
nsv1135873 | Chr.2:95981454 - 97579645 on Build GRCh38 | Deletion | LOC107984110 GPAT2 FAM178B FAHD2CP ANKRD23 SEMA4C ITPRIPL1 LOC100506123 ANKRD39 ANKRD36B SNRNP200 ADRA2B LOC105373495 DUSP2 ASTL LOC100506076 STARD7 LOC653924 NEURL3 FAHD2B LMAN2L KANSL3 ARID5A LOC105373496 FER1L5 CIAO1 STARD7-AS1 TMEM127 CNNM3 NCAPH CNNM4 MIR3127 ANKRD36 LOC101927053 ANKRD36C |
esv3425717 | Chr.2:95859900 - 97515905 on Build GRCh38 | Duplication | LOC107984110 GPAT2 FAM178B FAHD2CP ANKRD23 SEMA4C ITPRIPL1 LOC100506123 ANKRD39 ANKRD36B SNRNP200 ADRA2B LOC105373495 DUSP2 ASTL LOC100506076 STARD7 LOC653924 NEURL3 FAHD2B LMAN2L KANSL3 ARID5A LOC105373496 FER1L5 CIAO1 STARD7-AS1 TMEM127 CNNM3 NCAPH CNNM4 MIR3127 ANKRD36 LOC101927053 ANKRD36C |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |