Hs07154678_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:12997463 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	SYCE2 SNORD135 DAND5 SNORD41 MIR6515 NFIX RTBDN DHPS WDR83 ASNA1 MIR5695 LOC105372280 HOOK2 RNASEH2A GADD45GIP1 MAST1 RAD23A BEST2 FARSA TNPO2 MIR6794 KLF1 MIR5684 FBXW9 JUNB CALR PRDX2 DNASE2 GCDH C19orf43 WDR83OS
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	MIR5695 SYCE2 GADD45GIP1 DAND5 MIR6515 RAD23A NFIX FARSA CALR GCDH DNASE2 KLF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding